Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G125800 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.6e-68 262.3 174 100.0
CiPaw.13G085700 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.4e-45 186.8 182 79.7
CiPaw.01G217800 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.1e-45 185.7 182 79.1
CiPaw.09G066300 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.7e-31 138.3 174 59.8
CiPaw.01G053000 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.4e-29 132.9 172 59.9
CiPaw.14G106100 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.6e-28 130.2 167 60.5
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.9e-27 125.9 113 62.8
CiPaw.11G026600 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.5e-26 123.6 174 62.6
CiPaw.01G061900 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.5e-26 122.9 99 69.7
CiPaw.01G105900 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.3e-26 122.5 173 59.0
CiPaw.11G105700 Carya illinoinensis HOM05D009850 ORTHO05D011981 9.5e-26 120.9 99 61.6
CiPaw.16G049900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.2e-25 120.6 99 68.7
CiPaw.15G130200 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.6e-25 120.2 96 69.8
CiPaw.07G027100 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.1e-25 119.8 167 63.5
CiPaw.04G185500 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.6e-23 112.8 82 67.1
CiPaw.01G280200 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.2e-20 104.0 90 60.0
CiPaw.05G086500 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.7e-20 102.8 75 64.0
CiPaw.03G153800 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.3e-19 99.8 182 53.8
CiPaw.03G153700 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.8e-19 99.0 65 67.7
CiPaw.05G103700 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.0e-16 89.0 165 35.2
CiPaw.09G001000 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.4e-14 81.6 82 53.7
CiPaw.15G141100 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.8e-12 74.7 58 56.9
CiPaw.11G103900 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.6e-10 68.6 82 45.1
TPR.G31023 Trifolium pratense HOM05D019053 ORTHO05D020883 1.4e-08 63.9 58 46.6
TPR.G13864 Trifolium pratense HOM05D019053 ORTHO05D020883 6.8e-08 61.6 58 46.6
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 1.2e-07 60.8 45 55.6
CANSAT54G0644 Cannabis sativa HOM05D015495 ORTHO05D024749 1.5e-07 60.5 103 34.0
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.5e-07 60.5 74 45.9
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 2.0e-07 60.1 95 40.0
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 4.4e-07 58.9 95 40.0
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.5e-07 58.2 87 40.2
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 7.5e-07 58.2 98 40.8
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 9.8e-07 57.8 45 51.1
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 9.8e-07 57.8 74 43.2
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 1.3e-06 57.4 46 50.0
CiPaw.16G028500 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.3e-06 57.4 69 46.4
VMungo0720G1615 Vigna mungo HOM05D008573 ORTHO05D009911 1.3e-06 57.4 91 37.4
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-06 57.0 98 38.8
Lj5P132T39 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-06 57.0 98 39.8
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 1.7e-06 57.0 44 54.5
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 2.2e-06 56.6 98 38.8
Peaxi162Scf00064g02019 Petunia axillaris HOM05D001383 ORTHO05D000309 2.9e-06 56.2 45 53.3
Carub.0029s0002 Capsella rubella HOM05D010286 ORTHO05D011981 3.7e-06 55.8 60 43.3
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 3.7e-06 55.8 45 53.3
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 4.9e-06 55.5 45 51.1
Peaxi162Scf00091g00518 Petunia axillaris HOM05D001383 ORTHO05D000309 4.9e-06 55.5 66 42.4
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 6.4e-06 55.1 98 38.8
Nitab4.5_0000141g0260 Nicotiana tabacum HOM05D009794 ORTHO05D000309 6.4e-06 55.1 69 42.0
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 6.4e-06 55.1 66 43.9
Peaxi162Scf00273g01117 Petunia axillaris HOM05D001383 ORTHO05D000309 6.4e-06 55.1 45 53.3
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 6.4e-06 55.1 79 38.0
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 8.3e-06 54.7 90 37.8
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 8.3e-06 54.7 45 51.1


User provided reference genes

Program Settings