Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 3.4e-75 285.0 158 100.0
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 1.0e-42 177.2 161 70.2
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 1.3e-42 176.8 166 66.3
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 3.8e-42 175.3 100 85.0
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 3.8e-42 175.3 161 69.6
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 3.8e-42 175.3 161 69.6
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 3.8e-42 175.3 170 69.4
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 6.5e-42 174.5 159 67.3
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 1.1e-41 173.7 159 70.4
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 4.2e-41 171.8 160 68.1
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 4.2e-41 171.8 169 68.0
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 2.7e-40 169.1 171 66.1
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 6.1e-40 167.9 164 69.5
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 8.0e-40 167.5 163 68.1
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 3.0e-39 165.6 161 67.1
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 4.0e-39 165.2 166 66.9
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 5.2e-39 164.9 110 74.5
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 8.8e-39 164.1 166 66.9
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 1.5e-38 163.3 163 61.3
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 1.5e-38 163.3 163 61.3
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 2.0e-38 162.9 168 64.9
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 2.6e-38 162.5 168 64.3
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 9.8e-38 160.6 145 64.8
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 1.3e-37 160.2 160 65.6
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 2.8e-37 159.1 170 62.9
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 2.8e-37 159.1 151 64.2
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 4.9e-37 158.3 109 73.4
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 8.3e-37 157.5 145 64.8
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 1.1e-36 157.1 161 65.2
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 1.1e-36 157.1 161 65.8
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 1.4e-36 156.8 159 62.9
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 2.4e-36 156.0 154 68.2
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 5.4e-36 154.8 167 59.3
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 9.2e-36 154.1 167 59.3
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 1.2e-35 153.7 176 64.2
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 1.6e-35 153.3 149 62.4
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.0e-35 152.9 149 63.1
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 2.7e-35 152.5 160 62.5
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 3.5e-35 152.1 104 80.8
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 5.9e-35 151.4 149 61.7
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 5.0e-34 148.3 170 62.4
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 5.0e-34 148.3 162 64.8
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 5.0e-34 148.3 162 64.8
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 1.1e-33 147.1 166 63.9
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 1.1e-33 147.1 159 62.9
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 1.5e-33 146.7 153 64.1
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 1.9e-33 146.4 148 60.8
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 2.5e-33 146.0 160 58.8
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 2.5e-33 146.0 155 59.4
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 3.3e-33 145.6 113 74.3
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 7.3e-33 144.4 154 64.3
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 2.8e-32 142.5 159 57.9
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 3.6e-32 142.1 144 63.2
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 1.0e-31 140.6 161 59.6
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 1.0e-31 140.6 171 56.1
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 3.0e-31 139.0 88 80.7
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 5.2e-31 138.3 167 58.7
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 1.2e-30 137.1 154 59.7
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 1.2e-30 137.1 113 70.8
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 1.2e-30 137.1 161 59.6
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 1.5e-30 136.7 140 59.3
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 2.0e-30 136.3 166 56.6
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 1.3e-29 133.7 161 59.6
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 2.2e-29 132.9 160 51.9
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 6.4e-29 131.3 85 80.0
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 3.2e-28 129.0 157 58.6
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 5.4e-28 128.3 166 54.8
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 7.0e-28 127.9 145 55.2
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 1.2e-27 127.1 104 70.2
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 2.7e-27 125.9 105 70.5
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 4.6e-27 125.2 155 57.4
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 1.0e-26 124.0 162 56.2
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 1.0e-26 124.0 88 76.1
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 1.7e-26 123.2 155 57.4
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 1.7e-26 123.2 155 57.4
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 1.7e-26 123.2 155 57.4
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 2.3e-26 122.9 153 57.5
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 3.9e-26 122.1 159 56.6
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 6.6e-26 121.3 164 54.9
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 6.6e-26 121.3 155 56.8
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 1.1e-25 120.6 158 57.6
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 1.9e-25 119.8 152 46.1
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 2.8e-24 115.9 153 45.1
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 8.0e-24 114.4 225 36.0
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 1.4e-23 113.6 161 49.1
Prupe.6G149200 Prunus persica HOM05D007375 ORTHO05D009293 6.8e-23 111.3 105 67.6
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 9.8e-22 107.5 95 68.4
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 2.9e-21 105.9 59 81.4
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 2.9e-21 105.9 84 61.9
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 1.7e-18 96.7 84 66.7
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 2.3e-18 96.3 84 66.7
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 3.9e-18 95.5 133 51.1
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 1.1e-17 94.0 157 51.6
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 6.2e-16 88.2 41 87.8
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 7.5e-14 81.3 56 75.0
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 2.9e-13 79.3 112 51.8
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 2.1e-11 73.2 85 50.6
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 8.6e-10 67.8 36 91.7
TPR.G22173 Trifolium pratense HOM05D007375 ORTHO05D009293 8.1e-08 61.2 109 50.5
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 1.4e-07 60.5 30 80.0
PGR119G2080 Punica granatum HOM05D007375 ORTHO05D009293 1.4e-07 60.5 98 44.9


User provided reference genes

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