Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 3.8e-85 318.2 162 100.0
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 3.9e-66 255.0 164 76.2
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 2.6e-62 242.3 159 79.2
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 3.4e-62 241.9 168 69.6
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 3.4e-62 241.9 162 73.5
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 7.6e-62 240.7 162 72.8
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 2.9e-61 238.8 158 75.3
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.1e-60 236.9 159 76.7
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 7.1e-60 234.2 169 66.9
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 7.9e-59 230.7 157 69.4
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.0e-58 230.3 161 73.3
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 6.7e-58 227.6 159 71.7
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.5e-57 226.5 162 69.8
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 1.9e-57 226.1 155 71.0
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 2.5e-57 225.7 159 70.4
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 3.3e-57 225.3 162 70.4
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 5.7e-57 224.6 159 67.9
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 8.2e-56 220.7 157 69.4
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 8.2e-56 220.7 160 66.9
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.4e-55 219.2 170 65.3
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 4.1e-55 218.4 160 66.9
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 9.0e-55 217.2 157 67.5
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.2e-54 216.9 160 65.0
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 2.0e-54 216.1 159 68.6
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 2.0e-54 216.1 158 68.4
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 4.5e-54 214.9 171 63.7
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 5.9e-54 214.5 158 65.2
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 5.0e-53 211.5 156 65.4
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 2.5e-52 209.1 173 59.0
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 4.2e-52 208.4 156 66.0
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 9.3e-52 207.2 158 64.6
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.6e-51 206.5 157 65.0
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 6.1e-51 204.5 158 67.7
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 7.9e-51 204.1 160 60.0
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 7.9e-51 204.1 157 68.8
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 1.0e-50 203.8 158 67.7
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.3e-50 203.4 169 59.8
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 1.8e-50 203.0 202 54.0
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.3e-50 202.6 170 59.4
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 3.3e-49 198.7 150 64.7
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 4.3e-49 198.4 173 56.1
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 9.7e-49 197.2 158 61.4
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 2.0e-46 189.5 163 62.6
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.0e-46 189.5 157 58.0
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 2.6e-46 189.1 191 54.5
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 4.5e-46 188.3 155 60.0
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 1.7e-45 186.4 156 55.8
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 2.2e-45 186.0 171 55.6
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 2.9e-45 185.7 157 59.2
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 3.8e-45 185.3 155 58.7
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 3.8e-45 185.3 173 54.9
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 3.8e-45 185.3 172 55.8
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 6.5e-45 184.5 171 55.6
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 8.5e-45 184.1 171 55.0
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.1e-44 183.7 170 55.3
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 1.9e-44 183.0 173 54.3
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 4.2e-44 181.8 147 58.5
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 4.6e-43 178.3 174 54.0
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 4.6e-43 178.3 174 54.0
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 6.1e-43 177.9 174 54.0
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 6.1e-43 177.9 174 54.0
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 6.1e-43 177.9 174 54.0
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 3.0e-42 175.6 159 52.2
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 8.8e-42 174.1 155 56.8
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 8.8e-42 174.1 153 56.9
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 1.1e-41 173.7 145 57.9
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 1.5e-41 173.3 162 53.7
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 1.5e-41 173.3 156 53.8
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 2.0e-41 172.9 128 66.4
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 4.3e-41 171.8 154 55.8
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 4.3e-41 171.8 168 54.2
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 5.7e-41 171.4 163 53.4
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 7.4e-41 171.0 153 55.6
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 9.7e-41 170.6 153 55.6
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.3e-40 170.2 153 56.9
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 1.7e-40 169.9 156 52.6
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 8.2e-40 167.5 165 53.3
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 1.4e-39 166.8 162 51.9
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.6e-38 162.5 162 51.9
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 2.2e-37 159.5 150 52.0
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 5.0e-37 158.3 116 66.4
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 8.5e-37 157.5 161 51.6
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 5.5e-36 154.8 146 50.7
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 9.4e-36 154.1 138 57.2
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 7.9e-35 151.0 157 45.9
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 1.8e-34 149.8 154 46.1
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 8.8e-34 147.5 162 45.7
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 5.7e-33 144.8 154 44.8
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 1.0e-29 134.0 153 42.5
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 2.2e-29 132.9 100 61.0
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 3.2e-28 129.0 137 46.7
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 6.1e-27 124.8 152 42.1
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 3.3e-25 119.0 106 55.7
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 1.3e-21 107.1 91 56.0
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.7e-21 106.7 120 49.2
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 8.5e-21 104.4 82 64.6
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 1.4e-18 97.1 131 38.9
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 2.3e-18 96.3 76 63.2
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 6.8e-18 94.7 100 47.0
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 1.2e-17 94.0 91 50.5
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 4.7e-11 72.0 45 73.3
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 4.4e-09 65.5 58 50.0
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 7.0e-07 58.2 36 66.7


User provided reference genes

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