Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G119500 Carya illinoinensis HOM05D011602 ORTHO05D011791 2.4e-50 201.8 98 100.0
CsaV3_UNG208380 Cucumis sativus L. HOM05D011602 ORTHO05D011791 3.7e-43 177.9 98 88.8
Gohir.D08G098025 Gossypium hirsutum HOM05D011602 ORTHO05D011791 1.4e-37 159.5 96 82.3
Migut.E00954 Erythranthe guttata HOM05D011602 ORTHO05D011791 1.0e-29 133.3 96 68.8
Migut.H02256 Erythranthe guttata HOM05D011602 ORTHO05D011791 4.4e-28 127.9 78 75.6
Phvul.002G090588 Phaseolus vulgaris HOM05D011602 ORTHO05D011791 5.7e-28 127.5 110 68.2
Gohir.A04G039331 Gossypium hirsutum HOM05D011602 ORTHO05D011791 4.8e-27 124.4 77 80.5
Gohir.A05G323756 Gossypium hirsutum HOM05D011602 ORTHO05D011791 4.8e-27 124.4 77 80.5
Gohir.D02G124566 Gossypium hirsutum HOM05D011602 ORTHO05D011791 3.1e-26 121.7 77 79.2
SabraMtG0005800 Salix brachista HOM05D000963 ORTHO05D011791 3.2e-23 111.7 67 83.6
GSVIVG01010694001 Vitis vinifera HOM05D011602 ORTHO05D011791 8.8e-21 103.6 55 92.7
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.8e-19 97.8 51 88.2
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.1e-18 94.7 62 74.2
LjContig00319g0018281 Lotus japonicus HOM05D011602 ORTHO05D011791 3.5e-17 91.7 98 54.1
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.5e-15 84.3 77 58.4
MELO3C004808.2 Cucumis melo HOM05D011602 ORTHO05D011791 1.4e-13 79.7 51 72.5
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.8e-13 77.0 86 52.3
SGA_v2.0_scaffold4G02445 Striga asiatica HOM05D011602 ORTHO05D011791 2.0e-12 75.9 49 81.6
arahy.Tifrunner.gnm1.ann1.ZJEP1E Arachis hypogaea HOM05D000963 ORTHO05D011791 2.6e-12 75.5 45 82.2
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.6e-12 75.5 86 48.8
COL.COLO4_03250 Corchorus olitorius HOM05D011602 ORTHO05D011791 2.2e-11 72.4 40 82.5
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.8e-11 72.0 86 47.7
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.3e-08 63.2 34 85.3
SHI24929 Sapria himalayana HOM05D011602 ORTHO05D011791 2.2e-08 62.4 50 62.0
BolSC35t60681H Brassica oleracea HOM05D001325 ORTHO05D001540 3.8e-08 61.6 56 57.1
BolSC47t61057H Brassica oleracea HOM05D001325 ORTHO05D001540 3.8e-08 61.6 56 57.1
BraSC59t46512Z Brassica rapa HOM05D001325 ORTHO05D011791 2.7e-06 55.5 41 63.4


User provided reference genes

Program Settings