Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 8.4e-82 307.0 157 100.0
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 6.1e-56 221.1 162 71.0
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 3.9e-55 218.4 160 75.0
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 2.5e-54 215.7 163 73.0
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 4.1e-52 208.4 160 69.4
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 4.1e-52 208.4 154 74.0
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 5.3e-52 208.0 162 72.8
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 6.9e-52 207.6 160 68.8
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 5.9e-51 204.5 159 70.4
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 1.3e-50 203.4 159 70.4
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 3.8e-50 201.8 127 80.3
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 1.4e-49 199.9 138 75.4
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 1.9e-49 199.5 154 68.8
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 2.5e-49 199.1 158 70.3
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 7.2e-49 197.6 162 69.1
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 9.4e-49 197.2 127 78.0
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 3.6e-48 195.3 157 69.4
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 3.6e-48 195.3 153 66.7
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 4.6e-48 194.9 162 64.8
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 1.0e-47 193.7 154 66.9
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 1.4e-47 193.4 155 67.1
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 1.8e-47 193.0 138 73.9
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 3.0e-47 192.2 126 79.4
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 1.1e-46 190.3 125 77.6
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 1.1e-46 190.3 153 69.9
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 1.5e-46 189.9 140 69.3
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 1.5e-46 189.9 153 66.0
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 2.0e-46 189.5 148 65.5
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 2.6e-46 189.1 126 76.2
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.6e-46 189.1 126 76.2
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 3.3e-46 188.7 162 62.3
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.3e-45 186.8 157 66.2
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.7e-45 186.4 126 74.6
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.2e-45 186.0 126 74.6
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 2.2e-45 186.0 129 73.6
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 8.2e-45 184.1 127 74.0
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 8.2e-45 184.1 160 67.5
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 1.1e-44 183.7 161 65.2
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 1.1e-44 183.7 161 65.2
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 1.1e-44 183.7 161 65.2
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 1.1e-44 183.7 161 65.2
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 1.1e-44 183.7 161 65.2
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 1.4e-44 183.3 114 79.8
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 1.4e-44 183.3 150 63.3
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 1.8e-44 183.0 153 61.4
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 3.1e-44 182.2 132 70.5
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.2e-43 180.3 153 60.8
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 2.0e-43 179.5 125 69.6
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 5.9e-43 177.9 150 62.0
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 1.0e-42 177.2 161 62.1
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 1.0e-42 177.2 124 71.8
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 2.2e-42 176.0 148 65.5
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 5.0e-42 174.9 152 63.2
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 6.5e-42 174.5 133 72.2
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 8.5e-42 174.1 144 68.1
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 8.5e-42 174.1 127 69.3
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 8.5e-42 174.1 138 66.7
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 1.1e-41 173.7 164 62.8
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 1.4e-41 173.3 119 73.1
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 1.4e-41 173.3 131 67.2
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 2.5e-41 172.6 155 63.2
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 2.5e-41 172.6 134 67.2
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 5.5e-41 171.4 156 63.5
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 7.2e-41 171.0 119 72.3
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 9.4e-41 170.6 121 71.9
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 9.4e-41 170.6 136 66.2
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 2.1e-40 169.5 125 69.6
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 2.1e-40 169.5 152 61.8
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 2.7e-40 169.1 102 78.4
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 4.7e-40 168.3 153 58.2
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 6.7e-39 164.5 119 69.7
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 5.7e-38 161.4 156 56.4
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 6.3e-37 157.9 123 63.4
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 6.3e-37 157.9 134 64.9
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 4.1e-36 155.2 135 65.2
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 1.2e-35 153.7 154 54.5
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 4.5e-35 151.8 125 62.4
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 1.3e-34 150.2 127 65.4
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 2.5e-33 146.0 155 55.5
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 2.5e-33 146.0 95 72.6
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 4.2e-33 145.2 154 54.5
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 2.1e-32 142.9 114 66.7
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 6.7e-31 137.9 132 58.3
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 6.7e-31 137.9 99 71.7
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 1.2e-30 137.1 96 76.0
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 1.2e-30 137.1 136 56.6
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 1.5e-30 136.7 150 52.7
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 3.3e-30 135.6 100 73.0
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 5.7e-30 134.8 169 49.7
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 2.8e-29 132.5 122 59.0
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 3.5e-27 125.6 143 46.2
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 2.9e-26 122.5 127 51.2
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 4.2e-25 118.6 89 66.3
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 2.7e-24 115.9 97 64.9
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 5.2e-23 111.7 71 66.2
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 4.4e-22 108.6 116 50.9
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 3.5e-19 99.0 139 41.0
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 3.5e-19 99.0 119 48.7
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.9e-17 93.2 115 49.6
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 8.0e-16 87.8 120 43.3
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 1.8e-15 86.7 120 42.5
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 3.0e-15 85.9 124 39.5
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 2.8e-13 79.3 67 62.7
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 9.2e-12 74.3 117 41.9
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 3.3e-09 65.9 119 38.7
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 4.0e-07 58.9 69 52.2


User provided reference genes

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