Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G108400 Carya illinoinensis HOM05D006884 ORTHO05D008604 0.0e+00 1337.4 688 100.0
QL01p023227 Quercus lobata HOM05D006884 ORTHO05D008604 0.0e+00 1139.4 682 84.2
Cfa011353 Carpinus fangiana HOM05D006884 ORTHO05D008604 0.0e+00 1129.0 688 83.3
Haze_23897 Corylus avellana HOM05D006884 ORTHO05D008604 0.0e+00 1107.8 732 78.0
Atru.chr3.3680 Acer truncatum HOM05D006884 ORTHO05D008604 5.5e-295 1017.3 690 74.6
GSVIVG01025156001 Vitis vinifera HOM05D006884 ORTHO05D008604 1.5e-292 1009.2 686 75.5
Prupe.6G097500 Prunus persica HOM05D006884 ORTHO05D008604 4.1e-290 1001.1 683 75.7
Duzib168G2304 Durio zibethinus HOM05D006884 ORTHO05D008604 1.5e-287 992.6 690 73.9
COL.COLO4_05186 Corchorus olitorius HOM05D006884 ORTHO05D008604 1.4e-285 986.1 689 74.0
Manes.04G024400 Manihot esculenta HOM05D006884 ORTHO05D008604 1.8e-285 985.7 685 73.3
CANSAT54G0393 Cannabis sativa HOM05D006884 ORTHO05D008604 4.1e-282 974.5 687 72.6
CSS0004159 Camellia sinensis var. sinensis HOM05D006884 ORTHO05D008604 1.1e-279 966.5 678 72.3
Hma1.2p1_0071F.1_g038150 Hydrangea macrophylla HOM05D006884 ORTHO05D008604 2.8e-278 961.8 689 71.3
TWI38G0581 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 2.7e-273 945.3 691 70.3
PGR119G0543 Punica granatum HOM05D006884 ORTHO05D008604 1.0e-272 943.3 684 70.8
Gorai.013G255800 Gossypium raimondii HOM05D006884 ORTHO05D008604 1.3e-272 943.0 690 69.9
Actinidia07119 Actinidia chinensis HOM05D006884 ORTHO05D008604 1.1e-271 939.9 683 69.7
Gohir.D13G225000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 1.1e-271 939.9 690 69.7
arahy.Tifrunner.gnm1.ann1.AY6ICH Arachis hypogaea HOM05D006884 ORTHO05D008604 2.8e-270 935.3 678 69.3
RcHm_v2.0_Chr5g0060051 Rosa chinensis HOM05D006884 ORTHO05D008604 2.8e-270 935.3 679 70.8
Gohir.A13G221000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 1.0e-269 933.3 690 69.0
Eucgr.J00944 Eucalyptus grandis HOM05D006884 ORTHO05D008604 7.5e-268 927.2 687 69.1
vmacro03180 Vaccinium macrocarpon HOM05D006884 ORTHO05D008604 2.9e-267 925.2 685 68.5
TWI38G2405 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 1.6e-265 919.5 691 69.6
ClCG03G002300 Citrullus lanatus HOM05D006884 ORTHO05D008604 4.6e-265 917.9 688 67.6
DCAR_018827 Daucus carota HOM05D006884 ORTHO05D008604 5.6e-263 911.0 675 68.3
TAR369G0310 Trochodendron aralioides HOM05D006884 ORTHO05D008604 1.2e-262 909.8 690 68.3
FvH4_3g32920 Fragaria vesca HOM05D006884 ORTHO05D008604 1.6e-262 909.4 678 69.0
Lalb_Chr01g0004191 Lupinus albus HOM05D006884 ORTHO05D008604 1.8e-261 906.0 674 68.8
Ciclev10027944m.g Citrus clementina HOM05D006884 ORTHO05D008604 5.2e-261 904.4 674 69.1
Cc01_g11430 Coffea canephora HOM05D006884 ORTHO05D008604 1.3e-259 899.8 685 66.7
MELO3C005036.2 Cucumis melo HOM05D006884 ORTHO05D008604 1.4e-258 896.3 684 66.8
Aqoxy4G03234 Aquilegia oxysepala HOM05D006884 ORTHO05D008604 2.4e-258 895.6 692 67.1
FAN11G3181 Fragaria x ananassa HOM05D006884 ORTHO05D008604 3.2e-258 895.2 678 68.4
Lj3g0026527 Lotus japonicus HOM05D006884 ORTHO05D008604 3.5e-257 891.7 678 67.8
Phvul.011G073400 Phaseolus vulgaris HOM05D006884 ORTHO05D008604 3.9e-256 888.3 677 67.5
Psat7g223440 Pisum sativum HOM05D006884 ORTHO05D008604 5.0e-256 887.9 679 67.6
FAN25G2544 Fragaria x ananassa HOM05D006884 ORTHO05D008604 6.6e-256 887.5 680 67.6
VMungo1127G0767 Vigna mungo HOM05D006884 ORTHO05D008604 7.3e-255 884.0 677 67.2
Potri.009G014900 Populus trichocarpa HOM05D006884 ORTHO05D008604 2.1e-254 882.5 676 68.0
Glyma.11G154214 Glycine max HOM05D006884 ORTHO05D008604 2.8e-254 882.1 686 66.2
Cpa.g.sc139.78 Carica papaya HOM05D006884 ORTHO05D008604 2.3e-253 879.0 600 73.7
Lj2C1032T7 Lonicera japonica HOM05D006884 ORTHO05D008604 3.1e-253 878.6 711 65.3
Oeu005901.1 Olea europaea HOM05D006884 ORTHO05D008604 3.7e-251 871.7 702 64.2
TPR.G15554 Trifolium pratense HOM05D006884 ORTHO05D008604 7.1e-250 867.5 681 66.7
Sed0010984 Sechium edule HOM05D006884 ORTHO05D008604 1.6e-249 866.3 680 64.9
Medtr4g060500 Medicago truncatula HOM05D006884 ORTHO05D008604 6.0e-249 864.4 683 65.4
Solyc11g069170.2 Solanum lycopersicum HOM05D006884 ORTHO05D008604 2.4e-242 842.4 676 63.6
Peaxi162Scf00351g00322 Petunia axillaris HOM05D006884 ORTHO05D008604 1.6e-241 839.7 701 61.8
Sopen11g027910 Solanum pennellii HOM05D006884 ORTHO05D008604 1.6e-241 839.7 676 63.5
PSO063G0254 Papaver somniferum HOM05D006884 ORTHO05D008604 2.1e-241 839.3 682 64.8
PGSC0003DMG400008066 Solanum tuberosum HOM05D006884 ORTHO05D008604 5.6e-239 831.2 717 60.8
arahy.Tifrunner.gnm1.ann1.H1W27A Arachis hypogaea HOM05D006884 ORTHO05D008604 2.3e-232 809.3 602 68.6
Nitab4.5_0000999g0100 Nicotiana tabacum HOM05D006884 ORTHO05D008604 1.5e-231 806.6 728 58.4
MSTRG.12324 Avicennia marina HOM05D006884 ORTHO05D008604 3.6e-230 802.0 692 60.0
Ca_19247_v3 Cicer arietinum L. HOM05D006884 ORTHO05D008604 1.2e-228 797.0 683 63.0
Migut.N02612 Erythranthe guttata HOM05D006884 ORTHO05D008604 9.9e-228 793.9 694 59.9
Sc06g0010010 Simmondsia chinensis HOM05D006884 ORTHO05D008604 6.4e-227 791.2 679 62.3
Carub.0001s0732 Capsella rubella HOM05D006884 ORTHO05D008604 3.2e-226 788.9 690 61.9
Thhalv10006976m.g Eutrema salsugineum HOM05D006884 ORTHO05D008604 4.6e-225 785.0 698 61.2
THA.LOC104815748 Tarenaya hassleriana HOM05D006884 ORTHO05D008604 1.3e-224 783.5 690 61.7
Nitab4.5_0002186g0020 Nicotiana tabacum HOM05D006884 ORTHO05D008604 3.9e-224 781.9 638 63.2
AT1G07970 Arabidopsis thaliana HOM05D006884 ORTHO05D008604 1.1e-223 780.4 689 61.2
Thecc.09G259000 Theobroma cacao HOM05D006884 ORTHO05D008604 9.6e-223 777.3 487 78.6
PSO339G1719 Papaver somniferum HOM05D006884 ORTHO05D008604 5.3e-221 771.5 601 66.6
ECA238G4524 Erigeron canadensis HOM05D006884 ORTHO05D008604 9.0e-221 770.8 666 61.4
C05p05970 Brassica napus HOM05D006884 ORTHO05D008604 1.2e-220 770.4 699 60.4
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 7.6e-220 767.7 686 60.9
CARHR007750 Cardamine hirsuta HOM05D006884 ORTHO05D008604 1.7e-219 766.5 700 60.0
A06p05030 Brassica napus HOM05D006884 ORTHO05D008604 8.4e-219 764.2 699 59.2
HanXRQChr07g0197411 Helianthus annuus HOM05D006884 ORTHO05D008604 8.4e-219 764.2 691 59.3
Hund10472 Selenicereus undatus HOM05D006884 ORTHO05D008604 4.2e-218 761.9 692 60.7
BraA06t23709Z Brassica rapa HOM05D006884 ORTHO05D008604 3.9e-216 755.4 686 59.5
AL1G18300 Arabidopsis lyrata HOM05D006884 ORTHO05D008604 6.7e-216 754.6 685 60.1
ATR0759G051 Amborella trichopoda HOM05D006884 ORTHO05D008604 8.2e-214 747.7 684 58.2
Aa31LG8G13130 Aethionema arabicum HOM05D006884 ORTHO05D008604 2.9e-211 739.2 691 58.9
MBI14_g07928_MAGBIO Magnolia biondii HOM05D006884 ORTHO05D008604 4.9e-211 738.4 607 64.9
Lsat_1_v5_gn_2_97900 Lactuca sativa HOM05D006884 ORTHO05D008604 3.2e-210 735.7 690 57.7
AUR62025009 Chenopodium quinoa HOM05D006884 ORTHO05D008604 7.1e-210 734.6 685 58.5
SalBow3G0672 Salvia bowleyana HOM05D006884 ORTHO05D008604 2.7e-209 732.6 691 57.7
BcaB02g06701 Brassica carinata HOM05D006884 ORTHO05D008604 1.0e-208 730.7 680 59.4
SGA_v2.0_scaffold2G00907 Striga asiatica HOM05D006884 ORTHO05D008604 1.3e-208 730.3 641 59.6
BcaC05g24709 Brassica carinata HOM05D006884 ORTHO05D008604 2.5e-207 726.1 683 58.6
CsaV3_1G012990 Cucumis sativus L. HOM05D006884 ORTHO05D008604 2.0e-204 716.5 584 64.4
Sabra09G0009400 Salix brachista HOM05D006884 ORTHO05D008604 1.9e-202 709.9 498 72.1
AUR62006527 Chenopodium quinoa HOM05D006884 ORTHO05D008604 7.2e-202 708.0 679 57.4
CAN.G631.5 Capsicum annuum HOM05D006884 ORTHO05D008604 1.4e-197 693.7 620 58.4
SEGI_12216 Sequoiadendron giganteum HOM05D006884 ORTHO05D008604 4.8e-190 668.7 717 52.4
Os03g0288800 Oryza sativa ssp. japonica HOM05D006884 ORTHO05D008604 5.0e-187 658.7 681 53.9
Zm00001eb397080 Zea mays HOM05D006884 ORTHO05D008604 8.8e-184 647.9 681 52.4
HPP92_025089 Vanilla planifolia HOM05D006884 ORTHO05D008604 5.7e-183 645.2 674 52.7
CDE09G0273 Ceratophyllum demersum HOM05D006884 ORTHO05D008604 1.9e-178 630.2 635 54.6
Rhsim08G0043200 Rhododendron simsii HOM05D006884 ORTHO05D008604 8.3e-166 588.2 450 66.2
Sp4g05030 Schrenkiella parvula HOM05D006884 ORTHO05D008604 1.2e-164 584.3 604 55.0
Mapoly0043s0112 Marchantia polymorpha HOM05D006884 ORTHO05D008604 2.1e-145 520.4 705 44.5
unitig_61.g26171 Utricularia gibba HOM05D006884 ORTHO05D008604 5.8e-143 512.3 627 47.4
SMO364G0331 Selaginella moellendorffii HOM05D006884 ORTHO05D008604 5.6e-130 469.2 474 51.7
Pp3c12_22070 Physcomitrium patens HOM05D006884 ORTHO05D008604 9.5e-130 468.4 711 43.0
Actinidia24083 Actinidia chinensis HOM05D006884 ORTHO05D008604 1.2e-129 468.0 301 72.8
arahy.Tifrunner.gnm1.ann1.REDW7M Arachis hypogaea HOM05D006884 ORTHO05D008604 9.6e-122 441.8 281 74.4
BcaB07g34161 Brassica carinata HOM05D006884 ORTHO05D008604 9.3e-117 425.2 357 59.7
Actinidia24084 Actinidia chinensis HOM05D006884 ORTHO05D008604 1.4e-80 305.1 344 53.2
Glyma.12G071233 Glycine max HOM05D006884 ORTHO05D008604 3.2e-69 267.3 218 61.9
Nn1g02428 Nelumbo nucifera HOM05D006884 ORTHO05D008604 7.5e-42 176.4 103 79.6
Nn1g02077 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.8e-40 171.8 105 76.2
Nn3g17897 Nelumbo nucifera HOM05D006884 ORTHO05D008604 2.0e-39 168.3 105 74.3
Nn4g22222 Nelumbo nucifera HOM05D006884 ORTHO05D008604 8.6e-38 162.9 101 74.3
SEGI_34075 Sequoiadendron giganteum HOM05D000114 ORTHO05D008604 3.3e-37 161.0 462 30.3
Glyma.12G071167 Glycine max HOM05D006884 ORTHO05D008604 1.7e-33 148.7 200 47.5
Nn3g19002 Nelumbo nucifera HOM05D005115 ORTHO05D005703 4.3e-29 134.0 86 73.3
Nn4g22225 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.2e-28 132.5 103 61.2
Cre12.g555200 Chlamydomonas reinhardtii HOM05D006884 ORTHO05D008604 2.0e-18 98.6 326 27.6
Nn1g05254 Nelumbo nucifera HOM05D006884 ORTHO05D008604 2.7e-15 88.2 62 61.3
Nitab4.5_0002186g0030 Nicotiana tabacum HOM05D006884 ORTHO05D008604 1.9e-13 82.0 47 76.6
Aa31LG3G16570 Aethionema arabicum HOM05D006884 ORTHO05D008604 3.3e-13 81.3 183 32.2
Nn1g03843 Nelumbo nucifera HOM05D006884 ORTHO05D008604 4.7e-12 77.4 64 56.2


User provided reference genes

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