Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.6e-166 588.6 278 100.0
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.5e-129 466.5 272 79.4
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 1.3e-117 426.8 278 73.4
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 8.4e-109 397.5 247 74.1
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 4.2e-108 395.2 274 66.4
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 7.8e-107 391.0 245 72.7
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 1.0e-106 390.6 261 70.5
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 1.3e-106 390.2 269 67.3
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 1.7e-106 389.8 255 70.6
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 6.6e-106 387.9 253 70.0
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 9.6e-105 384.0 255 68.6
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.2e-104 383.6 251 71.3
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 1.2e-104 383.6 255 70.2
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 3.6e-104 382.1 251 70.9
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 4.7e-104 381.7 255 69.8
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 4.7e-104 381.7 278 65.8
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 1.4e-103 380.2 270 66.3
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 2.4e-103 379.4 278 64.7
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 6.9e-103 377.9 277 63.5
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 1.2e-102 377.1 253 68.4
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 4.4e-102 375.2 249 67.9
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 9.9e-102 374.0 249 68.3
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 1.3e-101 373.6 279 62.7
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.7e-101 373.2 255 65.9
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.7e-101 373.2 255 65.9
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 6.4e-101 371.3 243 70.0
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 6.4e-101 371.3 255 65.9
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.1e-100 370.5 255 65.9
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 1.4e-100 370.2 241 68.9
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 1.9e-100 369.8 277 67.5
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.9e-100 369.8 280 63.6
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 7.1e-100 367.9 255 65.5
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.7e-99 365.9 235 72.3
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 6.0e-99 364.8 233 70.0
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 6.0e-99 364.8 277 61.0
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 3.3e-97 359.0 266 61.7
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.6e-96 356.7 275 60.0
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 8.1e-96 354.4 233 69.1
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 9.0e-95 350.9 268 63.1
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.7e-93 346.7 300 56.3
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 4.6e-91 338.6 352 50.3
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 5.1e-90 335.1 292 53.8
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 1.3e-85 320.5 253 59.3
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 2.2e-85 319.7 249 63.1
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 2.9e-85 319.3 215 66.0
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 5.6e-81 305.1 201 71.1
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 6.9e-79 298.1 242 57.0
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 1.3e-77 293.9 257 56.4
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 1.3e-77 293.9 202 65.3
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 2.9e-77 292.7 247 53.4
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 3.2e-76 289.3 245 56.3
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 2.3e-74 283.1 248 53.6
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 1.1e-73 280.8 207 63.3
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 4.3e-73 278.9 247 55.1
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 2.6e-70 269.6 231 56.7
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 9.4e-68 261.2 193 60.1
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 3.6e-67 259.2 188 63.8
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 5.7e-65 251.9 214 59.8
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 4.5e-62 242.3 262 49.2
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 1.3e-61 240.7 157 70.1
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.2e-59 234.2 233 49.4
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 6.7e-58 228.4 233 47.2
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 6.7e-58 228.4 233 46.8
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.1e-57 227.6 233 46.4
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.0e-57 226.9 233 47.2
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 9.7e-57 224.6 165 60.6
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.7e-56 223.8 233 46.8
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.1e-55 219.5 234 45.7
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.1e-52 211.1 170 55.3
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 9.4e-52 208.0 211 52.1
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 1.2e-51 207.6 155 60.0
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 1.2e-46 191.0 251 36.3
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 6.5e-45 185.3 128 60.9
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.2e-43 181.0 233 34.8
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 2.7e-43 179.9 133 62.4
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.8e-42 177.2 230 35.2
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.8e-42 177.2 230 35.2
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 4.0e-34 149.4 93 73.1
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 1.1e-31 141.4 87 73.6
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 1.1e-31 141.4 94 71.3
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 2.9e-29 133.3 88 70.5
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 8.0e-27 125.2 87 69.0
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 8.0e-27 125.2 87 69.0
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 2.2e-24 117.1 74 66.2
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 1.7e-21 107.5 89 52.8
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 2.8e-19 100.1 114 43.9
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 9.8e-17 91.7 56 75.0
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.8e-11 73.6 44 77.3


User provided reference genes

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