Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 1.1e-182 643.3 356 100.0
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 1.9e-89 333.6 376 61.7
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 6.3e-77 292.0 398 49.7
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 1.6e-75 287.3 399 52.1
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 1.6e-75 287.3 360 53.9
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 7.7e-75 285.0 353 51.8
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 5.6e-73 278.9 375 50.9
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 2.8e-72 276.6 321 53.3
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 4.4e-70 269.2 363 48.8
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 2.9e-69 266.5 370 46.8
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 6.4e-69 265.4 377 48.5
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 3.0e-66 256.5 378 46.6
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 3.0e-66 256.5 325 50.2
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 5.0e-66 255.8 322 50.9
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 3.6e-64 249.6 341 49.0
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 1.4e-63 247.7 349 48.4
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 2.3e-63 246.9 391 45.5
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 1.4e-60 237.7 453 42.2
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 4.6e-59 232.6 329 47.1
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 7.8e-59 231.9 374 44.7
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 1.3e-58 231.1 347 48.4
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 2.3e-58 230.3 336 45.2
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 3.0e-58 229.9 343 46.4
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 1.5e-57 227.6 390 43.6
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 1.2e-56 224.6 382 42.9
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 1.2e-56 224.6 367 42.5
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 1.2e-56 224.6 346 45.7
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 2.8e-56 223.4 485 38.8
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 4.7e-56 222.6 332 45.5
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 8.1e-56 221.9 324 46.0
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 4.0e-55 219.5 332 46.4
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 5.8e-54 215.7 412 40.0
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 7.5e-54 215.3 449 38.5
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 1.4e-52 211.1 363 43.8
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 2.4e-52 210.3 471 40.3
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 1.5e-49 201.1 367 43.6
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 5.6e-49 199.1 382 38.7
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 9.5e-49 198.4 291 45.7
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 3.6e-48 196.4 432 40.7
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 2.3e-47 193.7 333 41.4
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 2.3e-47 193.7 428 38.1
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 3.7e-45 186.4 439 39.2
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 4.9e-45 186.0 473 34.2
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 6.4e-45 185.7 387 38.5
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 1.1e-44 184.9 549 35.0
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 4.1e-44 183.0 242 47.1
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 1.2e-43 181.4 358 42.7
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 1.6e-43 181.0 448 40.8
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 2.1e-43 180.6 328 39.9
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 2.1e-43 180.6 410 38.0
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 3.5e-43 179.9 444 39.9
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 6.0e-43 179.1 424 40.6
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 6.0e-43 179.1 436 36.2
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 1.7e-42 177.6 361 39.3
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 6.6e-42 175.6 407 37.8
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 1.5e-41 174.5 272 45.2
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 1.9e-41 174.1 325 40.0
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 3.3e-41 173.3 303 43.6
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 1.2e-40 171.4 576 32.6
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 3.6e-40 169.9 416 36.1
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 1.4e-39 167.9 392 38.0
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 2.4e-39 167.2 395 38.7
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 2.6e-38 163.7 365 39.5
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 5.8e-38 162.5 428 39.3
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 9.9e-38 161.8 407 33.9
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 3.8e-37 159.8 349 37.8
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 2.4e-36 157.1 372 38.2
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 3.2e-36 156.8 366 37.7
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 4.2e-36 156.4 341 37.8
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 4.2e-36 156.4 333 36.9
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 4.2e-36 156.4 495 38.0
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 7.1e-36 155.6 433 31.6
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 1.6e-35 154.5 424 34.7
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 2.1e-35 154.1 339 36.6
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 3.5e-35 153.3 350 37.1
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 7.8e-35 152.1 313 37.7
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 1.7e-34 151.0 343 36.4
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 2.3e-34 150.6 227 48.0
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 5.1e-34 149.4 339 36.6
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 1.5e-33 147.9 262 40.5
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 2.1e-32 144.1 284 41.2
DCAR_018924 Daucus carota HOM05D006297 ORTHO05D007873 4.8e-32 142.9 337 35.9
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 6.2e-32 142.5 576 30.6
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 8.1e-32 142.1 335 34.9
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 8.1e-32 142.1 338 35.8
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 1.4e-31 141.4 371 34.0
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 2.4e-31 140.6 338 34.9
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 5.3e-31 139.4 281 38.4
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 5.3e-31 139.4 281 38.4
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 6.9e-31 139.0 458 34.5
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 6.9e-31 139.0 337 35.0
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 6.9e-31 139.0 184 52.7
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 1.2e-30 138.3 322 37.3
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 9.9e-30 135.2 458 34.3
FAN16G1466 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.7e-29 134.4 554 30.9
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 2.2e-29 134.0 270 40.7
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 5.4e-28 129.4 123 59.3
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 5.4e-28 129.4 123 59.3
Dinv42987 Davidia involucrata HOM05D006297 ORTHO05D007873 1.6e-27 127.9 359 35.4
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 1.8e-26 124.4 442 31.7
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 6.7e-26 122.5 357 33.9
FAN21G2693 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.9e-25 120.9 575 30.4
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 1.9e-25 120.9 287 36.6
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 5.6e-25 119.4 311 34.4
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 7.4e-25 119.0 334 33.2
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 9.6e-25 118.6 155 48.4
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.3e-24 118.2 577 29.1
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 2.1e-24 117.5 255 37.3
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 6.2e-24 115.9 489 29.2
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 2.6e-22 110.5 287 35.2
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 1.7e-21 107.8 230 38.7
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 1.7e-21 107.8 416 29.3
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 4.9e-21 106.3 379 30.1
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 1.2e-19 101.7 379 28.5
HanXRQChr05g0135261 Helianthus annuus HOM05D006297 ORTHO05D007873 2.7e-19 100.5 308 33.1
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 7.9e-19 99.0 123 53.7
Dinv17043 Davidia involucrata HOM05D006297 ORTHO05D007873 1.1e-17 95.1 165 44.8
Dinv43111 Davidia involucrata HOM05D006297 ORTHO05D007873 1.1e-17 95.1 165 44.8
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 4.3e-17 93.2 274 33.9
PSO513G0159 Papaver somniferum HOM05D006297 ORTHO05D007873 5.3e-15 86.3 378 27.8
QL10p061553 Quercus lobata HOM05D006297 ORTHO05D007873 1.5e-14 84.7 251 32.7
EL10Ac7g16061 Beta vulgaris HOM05D006297 ORTHO05D007873 5.8e-14 82.8 154 40.9
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 1.1e-12 78.6 202 33.7
CDE07G0208 Ceratophyllum demersum HOM05D006297 ORTHO05D007873 1.9e-12 77.8 208 34.6
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 1.9e-12 77.8 438 26.9
SalBow1G2607 Salvia bowleyana HOM05D006297 ORTHO05D007873 1.2e-11 75.1 356 28.4
Ah.08g219890 Amaranthus hybridus HOM05D006297 ORTHO05D007873 1.3e-10 71.6 115 42.6
Lsat_1_v5_gn_5_169521 Lactuca sativa HOM05D006297 ORTHO05D007873 1.8e-10 71.2 308 30.8
HanXRQChr11g0340671 Helianthus annuus HOM05D006297 ORTHO05D007873 1.4e-07 61.6 90 45.6
Lsat_1_v5_gn_2_132020 Lactuca sativa HOM05D004189 ORTHO05D004092 2.6e-06 57.4 131 37.4
HPP92_015541 Vanilla planifolia HOM05D043147 ORTHO05D007873 7.6e-06 55.8 269 27.1


User provided reference genes

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