Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G080400 Carya illinoinensis HOM05D005811 ORTHO05D007070 1.6e-43 179.1 93 100.0
Cfa011662 Carpinus fangiana HOM05D005811 ORTHO05D007070 8.6e-34 146.7 94 84.0
VMungo0540G1301 Vigna mungo HOM05D005811 ORTHO05D007070 4.3e-33 144.4 91 86.8
Haze_24267 Corylus avellana HOM05D005811 ORTHO05D007070 9.5e-33 143.3 97 82.5
PGR102G1689 Punica granatum HOM05D005811 ORTHO05D007070 2.1e-32 142.1 94 83.0
Glyma.18G065900 Glycine max HOM05D005811 ORTHO05D007070 2.8e-32 141.7 93 83.9
Phvul.006G065100 Phaseolus vulgaris HOM05D005811 ORTHO05D007070 5.2e-31 137.5 92 82.6
TAR369G0215 Trochodendron aralioides HOM05D005811 ORTHO05D007070 8.9e-31 136.7 90 78.9
CANSAT54G2446 Cannabis sativa HOM05D005811 ORTHO05D007070 7.5e-30 133.7 97 74.2
Nn2g11406 Nelumbo nucifera HOM05D005811 ORTHO05D007070 4.9e-29 131.0 90 78.9
Lj6g0027141 Lotus japonicus HOM05D005811 ORTHO05D007070 2.4e-28 128.6 92 77.2
Duzib150G1392 Durio zibethinus HOM05D005811 ORTHO05D007070 4.1e-28 127.9 92 76.1
Duzib170G0110 Durio zibethinus HOM05D005811 ORTHO05D007070 5.4e-28 127.5 90 75.6
Cpa.g.sc112.49 Carica papaya HOM05D005811 ORTHO05D007070 1.6e-27 125.9 90 73.3
CiPaw.14G060800 Carya illinoinensis HOM05D005811 ORTHO05D007070 3.5e-27 124.8 94 74.5
Prupe.6G060300 Prunus persica HOM05D005811 ORTHO05D007070 3.5e-27 124.8 97 73.2
MBI14_g04429_MAGBIO Magnolia biondii HOM05D005811 ORTHO05D007070 6.0e-27 124.0 93 73.1
Potri.001G249600 Populus trichocarpa HOM05D005811 ORTHO05D007070 6.0e-27 124.0 95 75.8
Ca_05589_v3 Cicer arietinum L. HOM05D005811 ORTHO05D007070 1.0e-26 123.2 91 75.8
Nn2g13640 Nelumbo nucifera HOM05D005811 ORTHO05D007070 1.7e-26 122.5 90 76.7
Sabra16G0151600 Salix brachista HOM05D005811 ORTHO05D007070 3.9e-26 121.3 94 73.4
Thecc.09G304900 Theobroma cacao HOM05D005811 ORTHO05D007070 3.9e-26 121.3 91 74.7
TWI75G0861 Tripterygium wilfordii HOM05D005811 ORTHO05D007070 1.5e-25 119.4 91 75.8
Duzib168G1366 Durio zibethinus HOM05D005811 ORTHO05D007070 2.5e-25 118.6 92 73.9
Manes.02G121312 Manihot esculenta HOM05D005811 ORTHO05D007070 2.5e-25 118.6 96 71.9
TPR.G13272 Trifolium pratense HOM05D005811 ORTHO05D007070 3.3e-25 118.2 97 71.1
Glyma.11G176000 Glycine max HOM05D005811 ORTHO05D007070 7.3e-25 117.1 94 73.4
MBI06_g39483_MAGBIO Magnolia biondii HOM05D005811 ORTHO05D007070 7.3e-25 117.1 92 77.2
MBI06_g42850_MAGBIO Magnolia biondii HOM05D005811 ORTHO05D007070 7.3e-25 117.1 92 77.2
MD11G1079700 Malus domestica HOM05D005811 ORTHO05D007070 7.3e-25 117.1 98 70.4
Sed0022374 Sechium edule HOM05D005811 ORTHO05D007070 7.3e-25 117.1 98 69.4
LjContig00155g0018843 Lotus japonicus HOM05D005811 ORTHO05D007070 1.6e-24 115.9 92 76.1
MD03G1073700 Malus domestica HOM05D005811 ORTHO05D007070 8.1e-24 113.6 97 69.1
QL01p037422 Quercus lobata HOM05D005811 ORTHO05D007070 8.1e-24 113.6 92 72.8
Sabra09G0031000 Salix brachista HOM05D005811 ORTHO05D007070 1.1e-23 113.2 94 72.3
Sc06g0008440 Simmondsia chinensis HOM05D005811 ORTHO05D007070 1.1e-23 113.2 91 70.3
ClCG02G019670 Citrullus lanatus HOM05D005811 ORTHO05D007070 4.0e-23 111.3 100 71.0
Actinidia34450 Actinidia chinensis HOM05D000731 ORTHO05D003068 6.8e-23 110.5 94 70.2
Dinv28620 Davidia involucrata HOM05D005811 ORTHO05D007070 6.8e-23 110.5 90 73.3
MELO3C025865.2 Cucumis melo HOM05D005811 ORTHO05D007070 2.0e-22 109.0 99 68.7
Psat2g059240 Pisum sativum HOM05D005811 ORTHO05D007070 2.0e-22 109.0 95 67.4
CsaV3_6G016350 Cucumis sativus L. HOM05D005811 ORTHO05D007070 3.4e-22 108.2 100 70.0
Lalb_Chr04g0252281 Lupinus albus HOM05D005811 ORTHO05D007070 4.4e-22 107.8 92 66.3
Gohir.A05G089600 Gossypium hirsutum HOM05D005811 ORTHO05D007070 1.7e-21 105.9 98 65.3
Ciclev10029657m.g Citrus clementina HOM05D005811 ORTHO05D007070 4.9e-21 104.4 98 66.3
Gorai.009G093000 Gossypium raimondii HOM05D005811 ORTHO05D007070 4.9e-21 104.4 99 65.7
Lalb_Chr04g0252321 Lupinus albus HOM05D005811 ORTHO05D007070 4.9e-21 104.4 93 66.7
Nn4g22044 Nelumbo nucifera HOM05D005811 ORTHO05D007070 6.4e-21 104.0 86 67.4
Gohir.D05G090500 Gossypium hirsutum HOM05D005811 ORTHO05D007070 8.4e-21 103.6 99 63.6
Sed0014350 Sechium edule HOM05D005811 ORTHO05D007070 8.4e-21 103.6 95 69.5
THA.LOC104799405 Tarenaya hassleriana HOM05D005811 ORTHO05D007070 8.4e-21 103.6 94 64.9
RcHm_v2.0_Chr5g0068741 Rosa chinensis HOM05D005811 ORTHO05D007070 1.1e-20 103.2 96 65.6
Medtr5g069990 Medicago truncatula HOM05D005811 ORTHO05D007070 4.1e-20 101.3 106 57.5
Gohir.D03G117600 Gossypium hirsutum HOM05D005811 ORTHO05D007070 2.7e-19 98.6 92 64.1
Gorai.003G124000 Gossypium raimondii HOM05D005811 ORTHO05D007070 3.5e-19 98.2 92 64.1
Gohir.A03G049700 Gossypium hirsutum HOM05D005811 ORTHO05D007070 4.6e-19 97.8 92 64.1
Hma1.2p1_1010F.1_g247360 Hydrangea macrophylla HOM05D005811 ORTHO05D007070 6.0e-19 97.4 98 64.3
arahy.Tifrunner.gnm1.ann1.8DRC0W Arachis hypogaea HOM05D005811 ORTHO05D007070 7.8e-19 97.1 94 63.8
arahy.Tifrunner.gnm1.ann1.AMG8UC Arachis hypogaea HOM05D005811 ORTHO05D007070 7.8e-19 97.1 94 63.8
HPP92_012634 Vanilla planifolia HOM05D005811 ORTHO05D007070 1.0e-18 96.7 100 62.0
Hund04884 Selenicereus undatus HOM05D004319 ORTHO05D007070 6.6e-18 94.0 82 64.6
MSTRG.18574 Avicennia marina HOM05D005811 ORTHO05D007070 1.5e-17 92.8 98 61.2
Nn3g20363 Nelumbo nucifera HOM05D005811 ORTHO05D007070 1.5e-17 92.8 72 70.8
Nitab4.5_0000010g0190 Nicotiana tabacum HOM05D005811 ORTHO05D007070 1.5e-17 92.8 80 68.8
Solyc06g076790.1 Solanum lycopersicum HOM05D005811 ORTHO05D007070 1.5e-17 92.8 107 56.1
ATR0618G101 Amborella trichopoda HOM05D005811 ORTHO05D007070 3.3e-17 91.7 94 59.6
Manes.01G163700 Manihot esculenta HOM05D005811 ORTHO05D007070 4.3e-17 91.3 95 61.1
Nitab4.5_0004144g0020 Nicotiana tabacum HOM05D005811 ORTHO05D007070 1.6e-16 89.4 80 65.0
Ah.15g099770 Amaranthus hybridus HOM05D005811 ORTHO05D007070 2.1e-16 89.0 103 52.4
CAN.G394.109 Capsicum annuum HOM05D005811 ORTHO05D007070 3.6e-16 88.2 83 63.9
TPR.G24035 Trifolium pratense HOM05D005811 ORTHO05D007070 6.2e-16 87.4 100 56.0
Thhalv10015099m.g Eutrema salsugineum HOM05D005811 ORTHO05D007070 1.4e-15 86.3 101 56.4
vmacro02985 Vaccinium macrocarpon HOM05D005811 ORTHO05D007070 1.4e-15 86.3 93 60.2
Dinv14462 Davidia involucrata HOM05D005811 ORTHO05D007070 4.0e-15 84.7 62 71.0
FAN25G1329 Fragaria x ananassa HOM05D005811 ORTHO05D007070 4.0e-15 84.7 96 57.3
FvH4_3g38260 Fragaria vesca HOM05D005811 ORTHO05D007070 8.9e-15 83.6 96 57.3
FAN11G0366 Fragaria x ananassa HOM05D005811 ORTHO05D007070 8.9e-15 83.6 96 57.3
Thhalv10010831m.g Eutrema salsugineum HOM05D005811 ORTHO05D007070 1.2e-14 83.2 110 49.1
Nitab4.5_0000102g0070 Nicotiana tabacum HOM05D005811 ORTHO05D007070 1.2e-14 83.2 80 58.8
AUR62020102 Chenopodium quinoa HOM05D005811 ORTHO05D007070 2.0e-14 82.4 103 51.5
FAN21G0983 Fragaria x ananassa HOM05D005811 ORTHO05D007070 2.0e-14 82.4 96 56.2
CARHR272810 Cardamine hirsuta HOM05D005811 ORTHO05D007070 2.6e-14 82.0 98 51.0
FAN16G2097 Fragaria x ananassa HOM05D005811 ORTHO05D007070 2.6e-14 82.0 96 56.2
A06p27110 Brassica napus HOM05D005811 ORTHO05D007070 3.4e-14 81.6 96 52.1
BraA06t25647Z Brassica rapa HOM05D005811 ORTHO05D007070 3.4e-14 81.6 96 52.1
Nn1g05379 Nelumbo nucifera HOM05D005811 ORTHO05D007070 3.4e-14 81.6 61 73.8
AUR62001678 Chenopodium quinoa HOM05D005811 ORTHO05D007070 5.8e-14 80.9 103 50.5
Rhsim13G0071700 Rhododendron simsii HOM05D005811 ORTHO05D007070 5.8e-14 80.9 94 56.4
BcaC04g19852 Brassica carinata HOM05D005811 ORTHO05D007070 7.6e-14 80.5 99 54.5
BcaC04g19853 Brassica carinata HOM05D005811 ORTHO05D007070 7.6e-14 80.5 99 54.5
A10p15470 Brassica napus HOM05D005811 ORTHO05D007070 7.6e-14 80.5 99 54.5
BolC9t57959H Brassica oleracea HOM05D005811 ORTHO05D007070 7.6e-14 80.5 99 54.5
BraA10t43688Z Brassica rapa HOM05D005811 ORTHO05D007070 7.6e-14 80.5 99 54.5
Aa31LG4G15980 Aethionema arabicum HOM05D005811 ORTHO05D007070 9.9e-14 80.1 104 53.8
AL5G26310 Arabidopsis lyrata HOM05D005811 ORTHO05D007070 9.9e-14 80.1 94 51.1
BcaC01g02249 Brassica carinata HOM05D005811 ORTHO05D007070 9.9e-14 80.1 96 51.0
BolC3t19011H Brassica oleracea HOM05D005811 ORTHO05D007070 9.9e-14 80.1 96 51.0
AT3G47070 Arabidopsis thaliana HOM05D005811 ORTHO05D007070 1.3e-13 79.7 94 51.1
EL10Ac7g16131 Beta vulgaris HOM05D005811 ORTHO05D007070 1.3e-13 79.7 97 49.5
C09p51020 Brassica napus HOM05D005811 ORTHO05D007070 1.3e-13 79.7 99 52.5
BNapus_Darmor_BZH_scaffold_82p00020 Brassica napus HOM05D005811 ORTHO05D007070 1.7e-13 79.3 96 51.0
Sp6g20560 Schrenkiella parvula HOM05D005811 ORTHO05D007070 1.7e-13 79.3 99 54.5
PGSC0003DMG400030440 Solanum tuberosum HOM05D005811 ORTHO05D007070 2.2e-13 79.0 68 66.2
Potri.009G043600 Populus trichocarpa HOM05D005811 ORTHO05D007070 4.9e-13 77.8 96 56.2
Aqoxy2G00950 Aquilegia oxysepala HOM05D005811 ORTHO05D007070 6.4e-13 77.4 94 57.4
BcaB02g10703 Brassica carinata HOM05D005811 ORTHO05D007070 1.9e-12 75.9 98 50.0
MBI05_g30574_MAGBIO Magnolia biondii HOM05D000339 ORTHO05D000212 3.2e-12 75.1 88 58.0
A06p20460 Brassica napus HOM05D005811 ORTHO05D007070 4.2e-12 74.7 98 49.0
BraA06t25121Z Brassica rapa HOM05D005811 ORTHO05D007070 4.2e-12 74.7 98 49.0
Carub.0005s1331 Capsella rubella HOM05D005811 ORTHO05D007070 4.2e-12 74.7 99 46.5
C03p71300 Brassica napus HOM05D005811 ORTHO05D007070 5.4e-12 74.3 98 49.0
BolC3t19415H Brassica oleracea HOM05D005811 ORTHO05D007070 5.4e-12 74.3 98 49.0
BcaB01g00949 Brassica carinata HOM05D005811 ORTHO05D007070 1.2e-11 73.2 98 51.0
PGSC0003DMG400004165 Solanum tuberosum HOM05D005811 ORTHO05D007070 2.1e-11 72.4 100 50.0
BcaC01g01857 Brassica carinata HOM05D005811 ORTHO05D007070 2.7e-11 72.0 98 48.0
BcaC01g01858 Brassica carinata HOM05D005811 ORTHO05D007070 2.7e-11 72.0 98 48.0
CDE02G0229 Ceratophyllum demersum HOM05D005811 ORTHO05D007070 2.7e-11 72.0 89 52.8
Sp5g14660 Schrenkiella parvula HOM05D005811 ORTHO05D007070 2.7e-11 72.0 119 41.2
DCAR_018965 Daucus carota HOM05D005811 ORTHO05D007070 6.0e-11 70.9 106 50.0
Ca_14913_v3 Cicer arietinum L. HOM05D005811 ORTHO05D007070 2.3e-10 68.9 96 49.0
Peaxi162Scf01058g00001 Petunia axillaris HOM05D005811 ORTHO05D007070 3.0e-10 68.6 104 50.0
unitig_746.g26735 Utricularia gibba HOM05D005811 ORTHO05D007070 5.1e-10 67.8 99 49.5
Medtr3g462990 Medicago truncatula HOM05D005811 ORTHO05D007070 6.6e-10 67.4 95 49.5
Sopen06g033180 Solanum pennellii HOM05D005811 ORTHO05D007070 3.3e-09 65.1 107 45.8
GSVIVG01024785001 Vitis vinifera HOM05D005811 ORTHO05D007070 4.3e-09 64.7 90 51.1
Lalb_Chr10g0103291 Lupinus albus HOM05D005811 ORTHO05D007070 5.6e-09 64.3 94 50.0
Migut.D02091 Erythranthe guttata HOM05D005811 ORTHO05D007070 2.1e-08 62.4 107 49.5
Lsat_1_v5_gn_8_71220 Lactuca sativa HOM05D005811 ORTHO05D007070 2.1e-08 62.4 79 48.1
Os07g0243150 Oryza sativa ssp. japonica HOM05D019609 ORTHO05D007070 3.6e-08 61.6 85 49.4
SGA_v2.0_scaffold443G51693 Striga asiatica HOM05D005811 ORTHO05D007070 1.4e-07 59.7 65 53.8
unitig_899.g15251 Utricularia gibba HOM05D005811 ORTHO05D007070 1.2e-06 56.6 100 47.0
CAN.G780.4 Capsicum annuum HOM05D005811 ORTHO05D007070 5.8e-06 54.3 69 50.7
Carub.0008s1950 Capsella rubella HOM05D005811 ORTHO05D007070 9.9e-06 53.5 58 53.4


User provided reference genes

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