Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G075100 Carya illinoinensis HOM05D006514 ORTHO05D008138 6.0e-31 136.7 63 100.0
Dinv36061 Davidia involucrata HOM05D006514 ORTHO05D008138 4.2e-24 114.0 57 87.7
RcHm_v2.0_Chr5g0070251 Rosa chinensis HOM05D006514 ORTHO05D008138 1.2e-23 112.5 58 84.5
RcHm_v2.0_Chr7g0176991 Rosa chinensis HOM05D006514 ORTHO05D008138 2.7e-23 111.3 57 84.2
QL12p026562 Quercus lobata HOM05D006514 ORTHO05D008138 3.5e-23 110.9 58 86.2
Manes.05G162000 Manihot esculenta HOM05D006514 ORTHO05D008138 6.0e-23 110.2 57 84.2
QL12p026537 Quercus lobata HOM05D006514 ORTHO05D008138 7.9e-23 109.8 56 89.3
AT2G30942 Arabidopsis thaliana HOM05D006514 ORTHO05D008138 1.0e-22 109.4 55 83.6
Carub.0004s1216 Capsella rubella HOM05D006514 ORTHO05D008138 1.0e-22 109.4 55 83.6
Potri.002G263300 Populus trichocarpa HOM05D006514 ORTHO05D008138 1.3e-22 109.0 57 84.2
Gohir.D02G094200 Gossypium hirsutum HOM05D006514 ORTHO05D008138 3.0e-22 107.8 58 84.5
Gorai.005G107100 Gossypium raimondii HOM05D006514 ORTHO05D008138 3.0e-22 107.8 58 84.5
Thecc.08G024100 Theobroma cacao HOM05D006514 ORTHO05D008138 3.9e-22 107.5 55 85.5
Potri.002G263100 Populus trichocarpa HOM05D006514 ORTHO05D008138 5.1e-22 107.1 55 83.6
Sed0005431 Sechium edule HOM05D006514 ORTHO05D008138 5.1e-22 107.1 56 78.6
THA.LOC104800827 Tarenaya hassleriana HOM05D006514 ORTHO05D008138 5.1e-22 107.1 55 83.6
CsaV3_5G038690 Cucumis sativus L. HOM05D006514 ORTHO05D008138 8.7e-22 106.3 56 80.4
Prupe.6G054600 Prunus persica HOM05D006514 ORTHO05D008138 8.7e-22 106.3 53 86.8
Migut.N00499 Erythranthe guttata HOM05D006514 ORTHO05D008138 1.1e-21 105.9 55 83.6
Gohir.A03G078101 Gossypium hirsutum HOM05D006514 ORTHO05D008138 1.1e-21 105.9 58 82.8
PGR004G0716 Punica granatum HOM05D006514 ORTHO05D008138 1.1e-21 105.9 57 82.5
GSVIVG01037960001 Vitis vinifera HOM05D006514 ORTHO05D008138 1.1e-21 105.9 56 85.7
AL4G25910 Arabidopsis lyrata HOM05D006514 ORTHO05D008138 1.5e-21 105.5 53 84.9
BcaB06g28396 Brassica carinata HOM05D006514 ORTHO05D008138 1.9e-21 105.1 53 83.0
BcaB06g28465 Brassica carinata HOM05D006514 ORTHO05D008138 1.9e-21 105.1 53 83.0
C04p60100 Brassica napus HOM05D006514 ORTHO05D008138 1.9e-21 105.1 53 83.0
BolC4t27513H Brassica oleracea HOM05D006514 ORTHO05D008138 1.9e-21 105.1 53 83.0
CiPaw.07G206900 Carya illinoinensis HOM05D006514 ORTHO05D008138 1.9e-21 105.1 53 86.8
Duzib116G0168 Durio zibethinus HOM05D006514 ORTHO05D008138 1.9e-21 105.1 55 83.6
Potri.001G000400 Populus trichocarpa HOM05D006514 ORTHO05D008138 2.5e-21 104.8 55 83.6
A04p23650 Brassica napus HOM05D006514 ORTHO05D008138 3.3e-21 104.4 53 83.0
BraA04t17890Z Brassica rapa HOM05D006514 ORTHO05D008138 3.3e-21 104.4 53 83.0
Hma1.2p1_0203F.1_g086530 Hydrangea macrophylla HOM05D006514 ORTHO05D008138 3.3e-21 104.4 54 83.3
Hma1.2p1_0023F.1_g014910 Hydrangea macrophylla HOM05D006514 ORTHO05D008138 4.3e-21 104.0 54 83.3
AT1G06515 Arabidopsis thaliana HOM05D006514 ORTHO05D008138 9.6e-21 102.8 55 80.0
Duzib041G0253 Durio zibethinus HOM05D006514 ORTHO05D008138 9.6e-21 102.8 53 83.0
Thhalv10009956m.g Eutrema salsugineum HOM05D006514 ORTHO05D008138 9.6e-21 102.8 55 80.0
FvH4_3g38980 Fragaria vesca HOM05D006514 ORTHO05D008138 1.3e-20 102.4 53 83.0
FAN21G1628 Fragaria x ananassa HOM05D006514 ORTHO05D008138 1.3e-20 102.4 53 83.0
AL1G16530 Arabidopsis lyrata HOM05D006514 ORTHO05D008138 1.6e-20 102.1 55 78.2
Carub.0001s0587 Capsella rubella HOM05D006514 ORTHO05D008138 1.6e-20 102.1 55 78.2
TWI12G0206 Tripterygium wilfordii HOM05D006514 ORTHO05D008138 1.6e-20 102.1 57 80.7
Duzib093G1568 Durio zibethinus HOM05D000207 ORTHO05D001482 2.1e-20 101.7 55 81.8
Ciclev10023245m.g Citrus clementina HOM05D006514 ORTHO05D008138 3.7e-20 100.9 55 80.0
THA.LOC104815841 Tarenaya hassleriana HOM05D006514 ORTHO05D008138 3.7e-20 100.9 53 81.1
CARHR006120 Cardamine hirsuta HOM05D006514 ORTHO05D008138 4.8e-20 100.5 53 83.0
MD11G1070700 Malus domestica HOM05D006514 ORTHO05D008138 4.8e-20 100.5 59 78.0
MSTRG.24295 Avicennia marina HOM05D006514 ORTHO05D008138 6.3e-20 100.1 56 76.8
FAN16G2060 Fragaria x ananassa HOM05D006514 ORTHO05D008138 6.3e-20 100.1 54 81.5
unitig_85.g27236 Utricularia gibba HOM05D006514 ORTHO05D008138 6.3e-20 100.1 55 81.8
Cc10_g03090 Coffea canephora HOM05D006514 ORTHO05D008138 1.1e-19 99.4 56 75.0
SalBow8G0801 Salvia bowleyana HOM05D006514 ORTHO05D008138 1.4e-19 99.0 53 81.1
TWI36G0631 Tripterygium wilfordii HOM05D006514 ORTHO05D008138 2.4e-19 98.2 53 83.0
Eucgr.F04183 Eucalyptus grandis HOM05D006514 ORTHO05D008138 3.1e-19 97.8 52 84.6
BcaB02g06800 Brassica carinata HOM05D006514 ORTHO05D008138 4.1e-19 97.4 53 79.2
BcaC07g42061 Brassica carinata HOM05D006514 ORTHO05D008138 4.1e-19 97.4 53 79.2
A09p66940 Brassica napus HOM05D006514 ORTHO05D008138 4.1e-19 97.4 53 79.2
A10p05150 Brassica napus HOM05D006514 ORTHO05D008138 4.1e-19 97.4 53 79.2
C05p04760 Brassica napus HOM05D006514 ORTHO05D008138 4.1e-19 97.4 53 79.2
C08p51170 Brassica napus HOM05D006514 ORTHO05D008138 4.1e-19 97.4 53 79.2
BolC5t29247H Brassica oleracea HOM05D006514 ORTHO05D008138 4.1e-19 97.4 53 79.2
BolC8t52644H Brassica oleracea HOM05D006514 ORTHO05D008138 4.1e-19 97.4 53 79.2
BraA09t42029Z Brassica rapa HOM05D006514 ORTHO05D008138 4.1e-19 97.4 53 79.2
BraA10t42782Z Brassica rapa HOM05D006514 ORTHO05D008138 4.1e-19 97.4 53 79.2
MD03G1065900 Malus domestica HOM05D006514 ORTHO05D008138 5.3e-19 97.1 59 76.3
Oeu025460.1 Olea europaea HOM05D006514 ORTHO05D008138 1.5e-18 95.5 53 79.2
Cc07_g09230 Coffea canephora HOM05D006514 ORTHO05D008138 2.0e-18 95.1 55 76.4
CSS0043768 Camellia sinensis var. sinensis HOM05D006514 ORTHO05D008138 3.4e-18 94.4 57 75.4
Migut.H00182 Erythranthe guttata HOM05D006514 ORTHO05D008138 1.0e-17 92.8 53 73.6
Gohir.D01G105000 Gossypium hirsutum HOM05D006514 ORTHO05D008138 1.3e-17 92.4 54 77.8
Gorai.002G129000 Gossypium raimondii HOM05D006514 ORTHO05D008138 1.3e-17 92.4 54 77.8
Rhsim08G0113100 Rhododendron simsii HOM05D006514 ORTHO05D008138 1.3e-17 92.4 53 75.5
Oeu009866.1 Olea europaea HOM05D006514 ORTHO05D008138 2.2e-17 91.7 53 75.5
PSO339G3417 Papaver somniferum HOM05D006514 ORTHO05D008138 3.8e-17 90.9 60 66.7
Gohir.A01G116600 Gossypium hirsutum HOM05D006514 ORTHO05D008138 6.5e-17 90.1 52 78.8
CAN.G358.121 Capsicum annuum HOM05D006514 ORTHO05D008138 8.5e-17 89.7 54 72.2
SHI24607 Sapria himalayana HOM05D006514 ORTHO05D008138 8.5e-17 89.7 53 75.5
FAN11G3963 Fragaria x ananassa HOM05D006514 ORTHO05D008138 1.1e-16 89.4 53 75.5
PGSC0003DMG400015499 Solanum tuberosum HOM05D006514 ORTHO05D008138 1.1e-16 89.4 56 67.9
CARHR124460 Cardamine hirsuta HOM05D006514 ORTHO05D008138 1.4e-16 89.0 56 69.6
PSO801G0156 Papaver somniferum HOM05D006514 ORTHO05D008138 1.4e-16 89.0 55 70.9
PSO017G0544 Papaver somniferum HOM05D006514 ORTHO05D008138 1.9e-16 88.6 54 72.2
Nn1g05070 Nelumbo nucifera HOM05D006514 ORTHO05D008138 4.2e-16 87.4 49 79.6
TAR628G0909 Trochodendron aralioides HOM05D006514 ORTHO05D008138 9.3e-16 86.3 57 70.2
CANSAT01G0756 Cannabis sativa HOM05D006514 ORTHO05D008138 1.6e-15 85.5 50 72.0
DCAR_025932 Daucus carota HOM05D006514 ORTHO05D008138 1.6e-15 85.5 50 72.0
vmacro17857 Vaccinium macrocarpon HOM05D006514 ORTHO05D008138 2.1e-15 85.1 54 72.2
Lalb_Chr13g0293771 Lupinus albus HOM05D006514 ORTHO05D008138 2.7e-15 84.7 55 72.7
Lj4g0001345 Lotus japonicus HOM05D006514 ORTHO05D008138 3.6e-15 84.3 56 69.6
Glyma.05G140300 Glycine max HOM05D006514 ORTHO05D008138 1.8e-14 82.0 57 73.7
Lalb_Chr11g0074141 Lupinus albus HOM05D006514 ORTHO05D008138 1.8e-14 82.0 57 71.9
Zm00001eb368290 Zea mays HOM05D006514 ORTHO05D008138 1.8e-14 82.0 55 60.0
Glyma.08G095700 Glycine max HOM05D006514 ORTHO05D008138 2.3e-14 81.6 57 71.9
arahy.Tifrunner.gnm1.ann1.0361F1 Arachis hypogaea HOM05D006514 ORTHO05D008138 5.1e-14 80.5 56 69.6
arahy.Tifrunner.gnm1.ann1.TUTF01 Arachis hypogaea HOM05D006514 ORTHO05D008138 5.1e-14 80.5 56 69.6
arahy.Tifrunner.gnm1.ann1.40255N Arachis hypogaea HOM05D006514 ORTHO05D008138 6.7e-14 80.1 56 67.9
SEGI_00006 Sequoiadendron giganteum HOM05D006514 ORTHO05D008138 6.7e-14 80.1 53 67.9
arahy.Tifrunner.gnm1.ann1.4217G9 Arachis hypogaea HOM05D006514 ORTHO05D008138 1.5e-13 79.0 53 71.7
Lalb_Chr08g0232711 Lupinus albus HOM05D006514 ORTHO05D008138 1.9e-13 78.6 64 67.2
FAN16G1919 Fragaria x ananassa HOM05D006514 ORTHO05D008138 4.3e-13 77.4 95 44.2
Aa31LG1G7590 Aethionema arabicum HOM05D006514 ORTHO05D008138 7.4e-13 76.6 87 48.3
Phvul.002G183600 Phaseolus vulgaris HOM05D006514 ORTHO05D008138 7.4e-13 76.6 55 72.7
Os07g0446900 Oryza sativa ssp. japonica HOM05D006514 ORTHO05D008138 1.3e-12 75.9 56 57.1
CDE04G3777 Ceratophyllum demersum HOM05D006514 ORTHO05D008138 8.2e-12 73.2 43 76.7
Ca_07248_v3 Cicer arietinum L. HOM05D006514 ORTHO05D008138 2.4e-11 71.6 55 65.5
Os04g0518650 Oryza sativa ssp. japonica HOM05D006514 ORTHO05D008138 1.0e-09 66.2 47 66.0
FAN25G0650 Fragaria x ananassa HOM05D006514 ORTHO05D008138 2.2e-09 65.1 31 87.1
ATR0733G176 Amborella trichopoda HOM05D006514 ORTHO05D008138 2.9e-09 64.7 44 68.2
FAN11G3335 Fragaria x ananassa HOM05D006514 ORTHO05D008138 5.0e-09 63.9 45 66.7
Zm00001eb096700 Zea mays HOM05D007724 ORTHO05D009363 8.5e-09 63.2 54 50.0
CSS0047171 Camellia sinensis var. sinensis HOM05D006514 ORTHO05D008138 1.1e-08 62.8 34 76.5
C04p41290 Brassica napus HOM05D006514 ORTHO05D008138 4.2e-08 60.8 31 77.4
Lsat_1_v5_gn_1_26540 Lactuca sativa HOM05D006514 ORTHO05D008138 7.2e-08 60.1 36 75.0
Ah.06g182360 Amaranthus hybridus HOM05D006514 ORTHO05D008138 9.4e-08 59.7 31 80.6
Nitab4.5_0003410g0060 Nicotiana tabacum HOM05D006514 ORTHO05D008138 1.6e-07 58.9 28 92.9
CSS0042829 Camellia sinensis var. sinensis HOM05D006514 ORTHO05D008138 4.6e-07 57.4 79 43.0
CSS0047355 Camellia sinensis var. sinensis HOM05D006514 ORTHO05D008138 4.6e-07 57.4 79 43.0
Medtr7g024350 Medicago truncatula HOM05D006514 ORTHO05D008138 1.0e-06 56.2 31 74.2
Os07g0446600 Oryza sativa ssp. japonica HOM05D006514 ORTHO05D008138 3.0e-06 54.7 31 74.2
AagrBONN_evm.TU.Sc2ySwM_228.3660 Anthoceros agrestis HOM05D006514 ORTHO05D008138 6.7e-06 53.5 34 67.6


User provided reference genes

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