Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 2.1e-134 482.3 229 100.0
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 5.1e-112 407.9 226 85.4
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 2.0e-108 396.0 229 82.1
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 4.2e-106 388.3 230 81.3
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 1.2e-100 370.2 226 77.4
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 3.8e-99 365.2 229 79.9
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 2.5e-98 362.5 227 77.5
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 3.9e-96 355.1 226 75.7
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 6.7e-96 354.4 226 75.2
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 6.7e-96 354.4 226 75.2
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 8.7e-96 354.0 226 75.7
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.5e-95 352.4 226 75.2
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 1.6e-94 349.7 229 75.1
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 4.8e-94 348.2 223 76.2
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 8.2e-94 347.4 228 74.1
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 3.1e-93 345.5 230 73.5
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 3.1e-93 345.5 226 75.2
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 5.3e-93 344.7 229 73.4
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 5.3e-93 344.7 230 72.6
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 6.9e-93 344.4 228 74.1
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 3.4e-92 342.0 230 72.2
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 4.5e-92 341.7 228 73.2
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 7.7e-92 340.9 228 75.0
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 1.7e-91 339.7 234 72.2
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 2.9e-91 339.0 169 92.3
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 2.9e-91 339.0 169 92.3
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 8.5e-91 337.4 194 83.5
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 1.4e-90 336.7 235 71.5
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 1.9e-90 336.3 182 87.4
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 2.5e-90 335.9 217 75.1
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 1.6e-89 333.2 179 85.5
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 3.0e-88 328.9 186 82.3
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 5.1e-88 328.2 193 81.9
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 6.7e-88 327.8 231 69.7
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 3.3e-87 325.5 231 69.3
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 3.3e-87 325.5 171 88.3
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 3.3e-87 325.5 171 88.3
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 1.7e-86 323.2 178 84.8
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 2.2e-86 322.8 164 91.5
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 2.8e-86 322.4 186 84.4
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 8.2e-86 320.9 171 86.0
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 8.2e-86 320.9 171 86.0
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 1.8e-85 319.7 181 81.8
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 3.1e-85 318.9 229 68.1
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 5.3e-85 318.2 168 87.5
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 6.9e-85 317.8 223 70.9
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 6.9e-85 317.8 212 74.1
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 6.9e-85 317.8 224 71.0
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 9.1e-85 317.4 186 79.0
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.2e-84 317.0 182 80.8
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 1.2e-84 317.0 182 80.2
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 1.5e-84 316.6 165 88.5
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 2.0e-84 316.2 193 77.7
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 2.6e-84 315.8 165 89.1
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 2.6e-84 315.8 231 67.5
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 4.5e-84 315.1 183 79.2
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 7.7e-84 314.3 171 85.4
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 1.0e-83 313.9 169 85.2
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 1.0e-83 313.9 171 83.6
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 1.0e-83 313.9 171 83.0
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 3.8e-83 312.0 173 82.1
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 1.1e-82 310.5 222 68.9
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 3.2e-82 308.9 220 68.6
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 5.5e-82 308.1 185 77.8
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 7.2e-82 307.8 159 88.7
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 9.4e-82 307.4 156 90.4
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 1.2e-81 307.0 214 74.3
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 2.7e-81 305.8 173 81.5
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 3.6e-81 305.4 179 78.8
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 4.7e-81 305.1 173 80.3
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 4.7e-81 305.1 166 83.7
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 7.9e-81 304.3 178 79.8
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 1.1e-79 300.4 168 83.3
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 1.1e-79 300.4 197 74.6
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 4.4e-79 298.5 149 91.9
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 1.7e-78 296.6 172 79.7
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 3.7e-78 295.4 169 80.5
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 3.7e-78 295.4 169 84.0
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 4.8e-78 295.0 172 80.2
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 4.8e-78 295.0 172 80.2
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 4.8e-78 295.0 172 80.2
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 4.8e-78 295.0 170 77.1
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 6.3e-78 294.7 172 79.7
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 6.3e-78 294.7 172 79.7
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 6.3e-78 294.7 172 79.7
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 6.3e-78 294.7 169 81.1
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 8.2e-78 294.3 169 80.5
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 1.1e-77 293.9 169 79.9
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 3.1e-77 292.4 157 82.8
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 2.2e-75 286.2 168 81.5
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 2.5e-74 282.7 162 82.1
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 4.2e-74 282.0 180 76.1
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 5.5e-74 281.6 143 90.9
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.7e-67 260.0 130 90.8
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 6.5e-67 258.1 226 59.3
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 2.5e-66 256.1 158 75.3
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 2.7e-65 252.7 163 68.1
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 1.6e-60 236.9 147 81.0
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 7.7e-60 234.6 179 64.8
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 3.8e-59 232.3 122 86.9
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 8.0e-57 224.6 155 63.9
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 7.7e-52 208.0 107 87.9
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 1.4e-48 197.2 230 49.6
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 3.4e-47 192.6 122 71.3
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 1.0e-43 181.0 169 58.6
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 7.3e-42 174.9 130 61.5
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 2.8e-33 146.4 186 41.9
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 2.2e-30 136.7 111 59.5
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 6.4e-30 135.2 167 47.9
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 1.9e-13 80.5 42 83.3
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 9.9e-07 58.2 43 65.1


User provided reference genes

Program Settings