Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 1.7e-101 372.9 212 100.0
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 7.9e-67 257.7 219 69.4
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 3.2e-60 235.7 200 65.0
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 1.6e-59 233.4 214 65.4
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 1.3e-58 230.3 206 65.5
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 6.7e-58 228.0 152 82.9
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 1.1e-57 227.3 206 66.0
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.1e-57 227.3 152 76.3
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.5e-57 226.1 227 58.6
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.6e-56 223.4 201 64.2
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.7e-56 222.2 227 58.6
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 3.7e-56 222.2 165 70.9
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 8.2e-56 221.1 162 71.6
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.1e-55 220.7 225 57.3
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.1e-55 220.7 225 57.3
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 1.1e-55 220.7 216 60.2
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 1.8e-55 219.9 229 58.5
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 3.1e-55 219.2 201 64.2
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 5.3e-55 218.4 218 60.6
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 9.0e-55 217.6 214 57.5
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 9.0e-55 217.6 230 55.2
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 4.5e-54 215.3 211 57.3
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 5.9e-54 214.9 206 64.1
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 1.7e-53 213.4 217 58.5
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 3.8e-53 212.2 220 62.7
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 1.9e-52 209.9 219 62.1
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 1.9e-52 209.9 211 57.8
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.9e-52 209.9 214 60.3
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 4.2e-52 208.8 175 62.3
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 4.2e-52 208.8 198 63.6
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 5.5e-52 208.4 217 60.8
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 5.5e-52 208.4 155 71.0
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.2e-51 207.2 155 70.3
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 1.2e-51 207.2 157 69.4
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 1.6e-51 206.8 230 55.7
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 1.6e-51 206.8 221 61.1
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 4.6e-51 205.3 217 60.8
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 4.6e-51 205.3 216 59.3
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 7.9e-51 204.5 155 67.7
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 7.9e-51 204.5 203 63.5
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 1.0e-50 204.1 206 62.1
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 1.4e-50 203.8 180 61.7
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.8e-50 203.4 176 64.8
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 1.8e-50 203.4 227 52.4
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.0e-50 202.6 153 68.6
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 5.1e-50 201.8 135 74.1
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 5.1e-50 201.8 180 60.6
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 5.1e-50 201.8 221 60.6
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 6.7e-50 201.4 207 56.0
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 8.8e-50 201.1 212 55.7
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 8.8e-50 201.1 208 56.7
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 8.8e-50 201.1 111 86.5
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 1.1e-49 200.7 206 58.3
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.5e-49 200.3 158 67.7
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 2.0e-49 199.9 156 67.9
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 2.5e-49 199.5 206 56.3
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 3.3e-49 199.1 150 73.3
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 4.3e-49 198.7 149 75.2
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 4.3e-49 198.7 214 59.3
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 4.3e-49 198.7 209 57.9
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 3.7e-48 195.7 222 58.1
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.7e-48 195.7 179 64.2
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 4.8e-48 195.3 214 57.5
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 1.4e-47 193.7 154 70.8
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 1.8e-47 193.4 219 57.1
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 5.3e-47 191.8 171 67.3
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 9.1e-47 191.0 154 69.5
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 1.2e-46 190.7 206 52.9
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 1.5e-46 190.3 176 58.5
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.4e-46 189.1 155 66.5
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.4e-46 189.1 164 62.8
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 1.0e-45 187.6 150 72.7
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 1.3e-45 187.2 173 59.5
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 1.7e-45 186.8 171 65.5
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.2e-45 186.4 203 52.2
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 2.9e-45 186.0 177 58.8
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 2.9e-45 186.0 214 56.5
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 8.5e-45 184.5 147 66.7
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 8.5e-45 184.5 147 66.7
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 8.5e-45 184.5 178 61.8
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 8.5e-45 184.5 154 68.2
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 3.2e-44 182.6 147 66.0
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 7.2e-44 181.4 147 66.0
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 7.2e-44 181.4 147 66.0
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 7.2e-44 181.4 111 77.5
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 1.6e-43 180.3 149 65.1
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 6.1e-43 178.3 176 56.8
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 1.0e-42 177.6 109 78.9
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 1.0e-42 177.6 192 55.2
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.4e-42 177.2 109 76.1
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 1.8e-42 176.8 109 78.0
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 2.3e-42 176.4 159 60.4
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 6.7e-42 174.9 181 53.0
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 1.5e-41 173.7 109 76.1
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 2.6e-41 172.9 153 56.2
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 7.4e-41 171.4 109 75.2
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 1.3e-40 170.6 107 70.1
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 7.0e-39 164.9 103 78.6
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 2.0e-38 163.3 160 52.5
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 2.6e-38 162.9 200 49.5
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 6.5e-37 158.3 144 63.9
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 2.5e-36 156.4 167 56.3
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 6.1e-35 151.8 135 63.0
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 3.0e-34 149.4 139 56.1
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.2e-34 148.7 177 49.2
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 5.7e-33 145.2 217 49.3
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 2.8e-32 142.9 87 75.9
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 9.1e-31 137.9 145 75.9
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 2.5e-28 129.8 127 49.6
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 3.4e-25 119.4 108 52.8
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 7.5e-25 118.2 106 54.7
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 9.8e-25 117.9 170 48.2
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 2.2e-24 116.7 101 52.5
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 8.3e-24 114.8 170 51.8
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 2.0e-14 83.6 72 55.6
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.7e-13 80.5 155 39.4
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 4.1e-07 59.3 149 37.6
Ca_23582_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 7.0e-07 58.5 39 69.2


User provided reference genes

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