Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 0.0e+00 1196.0 617 100.0
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 0.0e+00 1126.7 617 93.5
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 0.0e+00 1107.8 618 91.4
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 0.0e+00 1107.4 618 90.9
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 0.0e+00 1105.5 618 91.3
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 0.0e+00 1097.4 618 90.1
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 0.0e+00 1095.5 618 90.0
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 0.0e+00 1094.7 618 90.0
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 0.0e+00 1091.6 618 89.6
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 0.0e+00 1090.5 684 84.5
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 0.0e+00 1086.6 618 89.5
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 0.0e+00 1085.5 618 89.2
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 0.0e+00 1083.9 618 89.2
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 0.0e+00 1080.1 618 89.5
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 0.0e+00 1080.1 628 87.3
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 0.0e+00 1076.6 625 87.7
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 0.0e+00 1076.2 618 88.3
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 4.2e-312 1074.3 615 88.3
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 2.3e-308 1061.6 619 87.7
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 2.3e-308 1061.6 619 87.6
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 3.0e-308 1061.2 615 87.6
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 3.9e-308 1060.8 618 87.4
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 3.9e-308 1060.8 618 87.5
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 5.1e-308 1060.4 618 87.7
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 5.3e-305 1050.4 616 87.3
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 2.6e-304 1048.1 618 86.1
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 5.8e-304 1047.0 618 86.2
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 9.9e-304 1046.2 618 87.2
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 4.9e-303 1043.9 618 86.2
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 4.9e-303 1043.9 642 84.0
ClCG09G008140 Citrullus lanatus HOM05D004954 ORTHO05D006267 1.4e-302 1042.3 618 86.7
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 1.2e-301 1039.3 618 85.9
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 3.5e-301 1037.7 618 85.1
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 1.8e-300 1035.4 618 85.1
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 5.1e-300 1033.9 618 85.0
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 8.7e-300 1033.1 617 85.1
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 2.8e-298 1028.1 619 84.7
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 3.7e-298 1027.7 657 81.7
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 1.4e-297 1025.8 621 84.4
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 2.0e-296 1021.9 620 84.4
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 8.4e-295 1016.5 620 85.2
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 1.9e-294 1015.4 624 83.3
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 3.5e-293 1011.1 619 83.4
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 3.5e-293 1011.1 619 83.4
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 1.0e-292 1009.6 618 83.8
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 1.8e-292 1008.8 618 82.4
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 3.1e-289 998.0 619 81.9
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 3.1e-289 998.0 617 81.7
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 3.1e-289 998.0 617 81.8
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 6.9e-289 996.9 617 81.5
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 2.0e-288 995.3 617 81.4
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 3.4e-288 994.6 623 81.7
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 1.7e-287 992.3 753 71.4
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 2.2e-287 991.9 617 81.0
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 5.0e-287 990.7 616 81.3
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 9.4e-286 986.5 617 80.9
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 4.6e-285 984.2 610 81.5
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 6.1e-285 983.8 618 80.6
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 6.1e-285 983.8 611 81.5
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 7.9e-285 983.4 614 80.5
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 7.9e-285 983.4 614 80.5
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 1.8e-284 982.2 617 80.4
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 2.5e-283 978.4 650 77.5
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 3.3e-283 978.0 645 77.7
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 3.4e-280 968.0 618 79.3
Cfa002884 Carpinus fangiana HOM05D004954 ORTHO05D006267 5.0e-279 964.1 516 94.2
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 2.5e-278 961.8 617 79.3
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 7.2e-278 960.3 629 77.7
Manes.13G054100 Manihot esculenta HOM05D004954 ORTHO05D006267 9.4e-278 959.9 542 89.5
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 1.4e-276 956.1 615 78.4
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 5.1e-276 954.1 615 78.0
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 7.4e-275 950.3 618 78.2
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 9.7e-275 949.9 618 78.3
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 3.7e-274 948.0 615 78.9
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 1.0e-271 939.9 615 78.0
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 4.7e-269 931.0 615 77.4
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 5.2e-268 927.5 616 75.0
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 5.7e-267 924.1 617 76.7
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 5.7e-267 924.1 618 76.4
SGA_v2.0_scaffold29G12103 Striga asiatica HOM05D004954 ORTHO05D006267 1.3e-266 922.9 575 80.7
Aa31sc420G20 Aethionema arabicum HOM05D004954 ORTHO05D006267 2.4e-265 918.7 583 80.3
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 9.1e-265 916.8 633 75.8
FvH4_2g17860 Fragaria vesca HOM05D004954 ORTHO05D006267 7.7e-264 913.7 517 88.2
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 1.9e-262 909.1 600 76.7
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 5.5e-262 907.5 618 76.7
TAR375G0531 Trochodendron aralioides HOM05D004954 ORTHO05D006267 1.2e-261 906.4 639 73.9
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 3.0e-260 901.7 602 76.1
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 8.3e-258 893.6 576 80.6
HPP92_017515 Vanilla planifolia HOM05D004954 ORTHO05D006267 1.4e-257 892.9 615 73.3
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 2.4e-257 892.1 624 75.6
Sabra14G0144200 Salix brachista HOM05D004954 ORTHO05D006267 6.6e-247 857.4 514 86.8
CDE04G1241 Ceratophyllum demersum HOM05D004954 ORTHO05D006267 4.7e-245 851.3 616 71.4
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 8.9e-244 847.0 616 69.8
Atru.chr12.963 Acer truncatum HOM05D004954 ORTHO05D006267 3.1e-228 795.4 447 90.8
FAN15G2379 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.5e-227 793.1 557 74.3
Lsat_1_v5_gn_5_178381 Lactuca sativa HOM05D004954 ORTHO05D006267 1.0e-223 780.4 567 73.9
Sc17g0001680 Simmondsia chinensis HOM05D004954 ORTHO05D006267 1.0e-223 780.4 469 83.4
Pp3c20_5680 Physcomitrium patens HOM05D004954 ORTHO05D006267 1.6e-221 773.1 615 60.8
SMO367G0402 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 3.0e-207 725.7 620 58.5
Mapoly0098s0023 Marchantia polymorpha HOM05D004954 ORTHO05D006267 4.4e-203 711.8 615 59.0
AagrBONN_evm.TU.Sc2ySwM_344.252 Anthoceros agrestis HOM05D004954 ORTHO05D006267 4.8e-189 665.2 649 52.4
Cpa.g.sc8.76 Carica papaya HOM05D004954 ORTHO05D006267 4.8e-181 638.6 362 90.9
COL.COLO4_03294 Corchorus olitorius HOM05D004954 ORTHO05D006267 7.2e-169 598.2 342 91.2
GSVIVG01006234001 Vitis vinifera HOM05D004954 ORTHO05D006267 3.9e-167 592.4 494 67.4
CARHR183510 Cardamine hirsuta HOM05D004954 ORTHO05D006267 1.1e-166 590.9 360 84.4
Os07g0185700 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 2.6e-163 579.7 616 51.3
arahy.Tifrunner.gnm1.ann1.R4R8P3 Arachis hypogaea HOM05D004954 ORTHO05D006267 4.1e-156 555.8 394 76.9
Zm00001eb301770 Zea mays HOM05D004954 ORTHO05D006267 2.2e-154 550.1 616 48.4
Zm00001eb278340 Zea mays HOM05D004954 ORTHO05D006267 8.8e-143 511.5 364 71.2
CBR_g32699 Chara braunii HOM05D004954 ORTHO05D006267 1.3e-125 454.5 511 46.2
MD05G1162300 Malus domestica HOM05D004954 ORTHO05D006267 1.4e-124 451.1 374 67.9
SMO302G0009 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 7.0e-124 448.7 598 45.5
vmacro21300 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 2.2e-117 427.2 282 81.6
MD05G1161600 Malus domestica HOM05D004954 ORTHO05D006267 1.2e-107 394.8 458 53.7
GSVIVG01002254001 Vitis vinifera HOM05D004954 ORTHO05D006267 1.9e-81 307.8 175 86.9
COL.COLO4_03295 Corchorus olitorius HOM05D004954 ORTHO05D006267 2.8e-80 303.9 171 88.3
SEGI_36119 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 5.8e-70 269.6 188 68.1
FAN15G2003 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.0e-66 258.8 149 91.3
FAN15G2507 Fragaria x ananassa HOM05D004954 ORTHO05D006267 6.5e-61 239.6 134 88.1
Sc17g0001690 Simmondsia chinensis HOM05D004954 ORTHO05D006267 8.4e-61 239.2 143 87.4
Cpa.g.sc8.77 Carica papaya HOM05D004954 ORTHO05D006267 3.4e-54 217.2 117 88.9
MD05G1161700 Malus domestica HOM05D004954 ORTHO05D006267 3.6e-51 207.2 122 84.4
Atru.chr12.964 Acer truncatum HOM05D004954 ORTHO05D006267 1.8e-50 204.9 151 68.9
Sabra14G0144300 Salix brachista HOM05D004954 ORTHO05D006267 2.2e-45 188.0 106 84.9
MBI18_g37244_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 1.1e-44 185.7 105 82.9
SEGI_30399 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.1e-44 185.7 135 69.6
VMungo0647G2582 Vigna mungo HOM05D004954 ORTHO05D006267 1.2e-43 182.2 105 90.5
Ca_12408_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 2.2e-40 171.4 178 53.4
MD05G1160200 Malus domestica HOM05D004954 ORTHO05D006267 2.0e-33 148.3 94 80.9
VMungo0647G1109 Vigna mungo HOM05D004954 ORTHO05D006267 2.2e-32 144.8 100 78.0
Ca_12409_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 1.0e-29 136.0 74 93.2
CBR_g49514 Chara braunii HOM05D000019 ORTHO05D001702 1.3e-24 119.0 106 51.9
QL09p053445 Quercus lobata HOM05D004954 ORTHO05D030058 1.7e-24 118.6 117 63.2
SEGI_32998 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.8e-23 115.2 86 70.9
MD05G1162200 Malus domestica HOM05D004954 ORTHO05D006267 1.6e-22 112.1 58 86.2
Ciclev10018232m.g Citrus clementina HOM05D004954 ORTHO05D006267 3.5e-22 110.9 76 75.0
PGSC0003DMG400008807 Solanum tuberosum HOM05D004954 ORTHO05D006267 2.5e-20 104.8 59 76.3
PGSC0003DMG400020114 Solanum tuberosum HOM05D004954 ORTHO05D006267 2.5e-20 104.8 59 76.3
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 4.2e-20 104.0 54 94.4
VMungo0464G0043 Vigna mungo HOM05D004954 ORTHO05D006267 1.6e-19 102.1 59 76.3
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 1.6e-19 102.1 59 76.3
Glyma.09G284100 Glycine max HOM05D004954 ORTHO05D006267 3.4e-17 94.4 50 82.0
Hma1.2p1_0066F.1_g035760 Hydrangea macrophylla HOM05D004954 ORTHO05D006267 7.7e-14 83.2 56 66.1
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 5.6e-12 77.0 48 85.4
MD05G1162500 Malus domestica HOM05D004954 ORTHO05D006267 5.6e-12 77.0 80 52.5
TAR375G0464 Trochodendron aralioides HOM05D004954 ORTHO05D006267 5.6e-12 77.0 43 83.7
Medtr3g114845 Medicago truncatula HOM05D004954 ORTHO05D006267 8.9e-10 69.7 44 59.1
SEGI_31941 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.3e-08 65.9 38 76.3
QL09p053081 Quercus lobata HOM05D002786 ORTHO05D030058 4.9e-08 63.9 43 76.7
Hma1.2p1_0717F.1_g208260 Hydrangea macrophylla HOM05D007286 ORTHO05D008955 5.9e-06 57.0 34 79.4
MD05G1162600 Malus domestica HOM05D004954 ORTHO05D006267 5.9e-06 57.0 32 90.6


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