Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 1.1e-203 713.0 345 100.0
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 8.1e-154 547.4 367 74.7
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 2.7e-141 505.8 445 60.0
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 2.7e-133 479.2 365 66.3
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 7.9e-133 477.6 365 66.3
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.6e-130 469.9 365 65.2
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 2.8e-130 469.2 373 64.6
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 2.4e-129 466.1 370 64.3
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 7.6e-128 461.1 402 61.2
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.3e-127 460.3 370 63.8
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 3.8e-127 458.8 404 60.4
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.8e-127 458.8 371 63.9
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 3.8e-127 458.8 371 65.2
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 3.8e-127 458.8 358 65.6
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 6.5e-127 458.0 371 64.2
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 8.5e-127 457.6 371 64.7
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 8.5e-127 457.6 372 62.9
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.8e-124 449.9 387 60.2
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 1.1e-123 447.2 362 63.3
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 1.1e-123 447.2 364 64.3
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 9.7e-123 444.1 357 63.0
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 1.3e-122 443.7 371 60.9
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 3.7e-122 442.2 346 66.2
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.1e-121 440.7 401 59.4
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 1.4e-121 440.3 382 60.2
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 5.3e-121 438.3 358 63.1
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 6.9e-121 438.0 358 62.6
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.2e-120 437.2 302 71.9
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 2.0e-120 436.4 359 62.4
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 2.6e-120 436.0 353 63.5
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 3.4e-120 435.6 357 63.0
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 4.5e-120 435.3 361 62.0
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 4.5e-120 435.3 319 68.7
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 7.7e-120 434.5 368 60.9
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 1.0e-119 434.1 286 74.5
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 1.7e-119 433.3 362 61.9
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 2.2e-119 433.0 356 63.8
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 1.1e-118 430.6 262 77.1
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 3.2e-118 429.1 368 61.1
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 9.4e-118 427.6 370 61.9
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 2.0e-115 419.9 346 63.0
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 4.4e-115 418.7 263 75.7
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 1.3e-114 417.2 447 51.2
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.7e-114 416.8 367 59.1
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 4.8e-114 415.2 376 59.8
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 4.8e-114 415.2 375 59.7
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 1.4e-113 413.7 394 55.3
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.5e-112 410.2 363 59.5
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 1.5e-112 410.2 369 58.5
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 3.4e-112 409.1 417 54.0
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 7.7e-112 407.9 363 58.7
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 7.7e-112 407.9 390 57.9
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 2.2e-111 406.4 369 58.8
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 2.2e-111 406.4 407 53.3
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 5.0e-111 405.2 316 63.9
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 3.6e-109 399.1 263 69.6
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 5.2e-108 395.2 368 57.1
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 5.2e-108 395.2 354 59.3
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 8.8e-108 394.4 313 62.3
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 8.8e-108 394.4 367 57.8
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 2.0e-107 393.3 298 63.1
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 3.3e-107 392.5 321 61.7
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.7e-106 390.2 284 65.8
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 8.2e-106 387.9 257 69.6
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 8.2e-106 387.9 335 59.7
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 2.0e-104 383.3 268 68.3
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 3.5e-104 382.5 319 59.6
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 4.5e-104 382.1 255 70.6
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 7.7e-104 381.3 357 56.0
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 1.3e-103 380.6 255 70.2
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 1.3e-103 380.6 255 70.2
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 6.5e-103 378.3 264 68.2
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 3.2e-102 375.9 260 69.2
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 5.5e-102 375.2 392 52.3
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 1.2e-101 374.0 392 52.3
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 2.1e-101 373.2 380 54.5
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 3.7e-98 362.5 275 66.2
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.8e-97 360.1 394 51.5
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.0e-92 344.4 380 48.4
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 1.4e-92 344.0 341 53.4
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 7.7e-88 328.2 254 68.5
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 7.7e-88 328.2 399 48.9
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.5e-86 323.9 278 61.5
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 5.5e-86 322.0 341 51.3
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 3.6e-85 319.3 294 55.8
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 4.7e-85 318.9 276 63.4
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 8.8e-84 314.7 372 50.5
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 6.6e-79 298.5 265 55.5
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.5e-78 296.6 172 79.7
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 1.8e-76 290.4 336 51.8
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 8.9e-76 288.1 182 76.9
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 2.4e-73 280.0 288 53.8
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 7.0e-73 278.5 364 47.8
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.0e-71 274.6 260 55.0
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 8.9e-68 261.5 280 53.2
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 4.3e-62 242.7 191 56.5
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.9e-57 227.3 344 43.6
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 3.9e-55 219.5 152 65.8
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 9.5e-54 214.9 113 86.7
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 9.5e-54 214.9 212 51.9
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 6.8e-52 208.8 178 61.8
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 3.2e-49 199.9 293 41.6
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.2e-45 188.0 248 40.3
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 1.0e-39 168.3 91 86.8
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 4.0e-36 156.4 87 75.9
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.5e-35 154.5 226 45.6
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 7.1e-33 145.6 120 62.5
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 2.1e-32 144.1 84 73.8
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 1.6e-29 134.4 281 32.7
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 2.4e-25 120.6 134 45.5
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 7.1e-25 119.0 224 39.7
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 1.6e-24 117.9 142 47.9
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 6.0e-24 115.9 247 34.0
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 9.0e-20 102.1 84 54.8
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 1.5e-14 84.7 58 69.0
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 2.4e-12 77.4 47 72.3
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 2.0e-11 74.3 102 45.1
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 3.3e-06 57.0 179 31.3


User provided reference genes

Program Settings