Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G054500 Carya illinoinensis HOM05D008716 ORTHO05D010396 7.3e-71 270.4 131 100.0
QL09p045905 Quercus lobata HOM05D008716 ORTHO05D010396 1.0e-24 117.1 90 70.0
Potri.002G250100 Populus trichocarpa HOM05D008716 ORTHO05D010396 1.3e-24 116.7 96 66.7
Thecc.01G212000 Theobroma cacao HOM05D008716 ORTHO05D010396 1.8e-24 116.3 98 68.4
Cfa014542 Carpinus fangiana HOM05D008716 ORTHO05D010396 1.1e-23 113.6 96 67.7
Haze_13082 Corylus avellana HOM05D008716 ORTHO05D010396 5.6e-23 111.3 96 65.6
Duzib133G0923 Durio zibethinus HOM05D008716 ORTHO05D010396 4.8e-22 108.2 98 67.3
Cc01_g16240 Coffea canephora HOM05D008716 ORTHO05D010396 8.1e-22 107.5 95 62.1
Haze_13081 Corylus avellana HOM05D008716 ORTHO05D010396 1.1e-21 107.1 91 63.7
Glyma.08G344900 Glycine max HOM05D008716 ORTHO05D010396 1.4e-21 106.7 95 65.3
Gohir.A11G142000 Gossypium hirsutum HOM05D008716 ORTHO05D010396 3.1e-21 105.5 98 62.2
RcHm_v2.0_Chr6g0283141 Rosa chinensis HOM05D008716 ORTHO05D010396 3.1e-21 105.5 96 60.4
Hma1.2p1_0161F.1_g071310 Hydrangea macrophylla HOM05D008716 ORTHO05D010396 5.3e-21 104.8 95 64.2
Gorai.007G159000 Gossypium raimondii HOM05D008716 ORTHO05D010396 6.9e-21 104.4 98 61.2
VMungo1383G3111 Vigna mungo HOM05D008716 ORTHO05D010396 2.6e-20 102.4 95 64.2
Gohir.D11G148300 Gossypium hirsutum HOM05D008716 ORTHO05D010396 5.8e-20 101.3 98 60.2
CANSAT01G0992 Cannabis sativa HOM05D008716 ORTHO05D010396 1.0e-19 100.5 97 57.7
Manes.12G052800 Manihot esculenta HOM05D008716 ORTHO05D010396 1.0e-19 100.5 96 61.5
Phvul.008G137500 Phaseolus vulgaris HOM05D008716 ORTHO05D010396 1.0e-19 100.5 95 63.2
Prupe.8G191500 Prunus persica HOM05D008716 ORTHO05D010396 1.7e-19 99.8 90 62.2
TPR.G26813 Trifolium pratense HOM05D008716 ORTHO05D010396 4.9e-19 98.2 96 63.5
Sed0019156 Sechium edule HOM05D008716 ORTHO05D010396 8.4e-19 97.4 91 60.4
Eucgr.K02092 Eucalyptus grandis HOM05D008716 ORTHO05D010396 1.1e-18 97.1 93 59.1
Ciclev10033963m.g Citrus clementina HOM05D008716 ORTHO05D010396 1.9e-18 96.3 112 49.1
Nitab4.5_0000038g0060 Nicotiana tabacum HOM05D008716 ORTHO05D010396 2.5e-18 95.9 93 62.4
Gohir.D07G095100 Gossypium hirsutum HOM05D008716 ORTHO05D010396 4.2e-18 95.1 97 55.7
Ca_07396_v3 Cicer arietinum L. HOM05D008716 ORTHO05D010396 1.2e-17 93.6 91 61.5
MELO3C021138.2 Cucumis melo HOM05D008716 ORTHO05D010396 2.7e-17 92.4 91 60.4
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.5e-17 92.0 88 59.1
Lsat_1_v5_gn_9_16200 Lactuca sativa HOM05D008716 ORTHO05D010396 3.5e-17 92.0 96 56.2
Psat3g151280 Pisum sativum HOM05D008716 ORTHO05D010396 3.5e-17 92.0 91 62.6
Lj1g0004683 Lotus japonicus HOM05D008716 ORTHO05D010396 7.9e-17 90.9 86 64.0
Medtr7g052240 Medicago truncatula HOM05D008716 ORTHO05D010396 1.5e-15 86.7 97 58.8
Nn1g08284 Nelumbo nucifera HOM05D008716 ORTHO05D010396 1.3e-14 83.6 94 47.9
SalBow3G3739 Salvia bowleyana HOM05D008716 ORTHO05D010396 8.2e-14 80.9 90 53.3
Migut.N00660 Erythranthe guttata HOM05D008716 ORTHO05D010396 2.4e-13 79.3 97 52.6
Sopen06g034510 Solanum pennellii HOM05D008716 ORTHO05D010396 3.1e-13 79.0 94 55.3
Gorai.001G102400 Gossypium raimondii HOM05D008716 ORTHO05D010396 4.1e-13 78.6 86 54.7
Solyc06g083120.1 Solanum lycopersicum HOM05D008716 ORTHO05D010396 1.2e-12 77.0 94 54.3
Lalb_Chr01g0022011 Lupinus albus HOM05D008716 ORTHO05D010396 1.3e-11 73.6 95 50.5
Migut.D00724 Erythranthe guttata HOM05D008716 ORTHO05D010396 3.8e-11 72.0 96 51.0
BraA05t22807Z Brassica rapa HOM05D010897 ORTHO05D010396 5.1e-08 61.6 87 49.4
Thhalv10021826m.g Eutrema salsugineum HOM05D010897 ORTHO05D010396 6.7e-08 61.2 99 47.5
A05p40760 Brassica napus HOM05D010897 ORTHO05D010396 1.1e-07 60.5 87 48.3
BcaC05g29535 Brassica carinata HOM05D010897 ORTHO05D010396 1.5e-07 60.1 87 49.4
CARHR082070 Cardamine hirsuta HOM05D010897 ORTHO05D010396 1.5e-07 60.1 87 49.4
BcaB03g14702 Brassica carinata HOM05D010897 ORTHO05D010396 1.9e-07 59.7 87 49.4
BraA03t12703Z Brassica rapa HOM05D010897 ORTHO05D010396 1.9e-07 59.7 87 49.4
Sp3g06350 Schrenkiella parvula HOM05D010897 ORTHO05D010396 1.9e-07 59.7 87 48.3
Carub.0003s0697 Capsella rubella HOM05D010897 ORTHO05D010396 2.5e-07 59.3 87 46.0
Peaxi162Scf01242g00122 Petunia axillaris HOM05D008716 ORTHO05D010396 3.3e-07 58.9 91 47.3
BcaC01g04283 Brassica carinata HOM05D010897 ORTHO05D010396 4.3e-07 58.5 87 48.3
C03p42870 Brassica napus HOM05D010897 ORTHO05D010396 4.3e-07 58.5 87 48.3
C05p59870 Brassica napus HOM05D010897 ORTHO05D010396 4.3e-07 58.5 87 48.3
BolC3t16555H Brassica oleracea HOM05D010897 ORTHO05D010396 4.3e-07 58.5 87 48.3
BolC5t34641H Brassica oleracea HOM05D010897 ORTHO05D010396 4.3e-07 58.5 87 48.3
Aa31LG5G18000 Aethionema arabicum HOM05D010897 ORTHO05D010396 5.7e-07 58.2 100 43.0
AT3G07425 Arabidopsis thaliana HOM05D010897 ORTHO05D010396 1.3e-06 57.0 99 42.4
A03p35250 Brassica napus HOM05D010897 ORTHO05D010396 4.8e-06 55.1 87 47.1
THA.LOC104822469 Tarenaya hassleriana HOM05D010897 ORTHO05D010396 8.2e-06 54.3 98 42.9


User provided reference genes

Program Settings