Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G050500 Carya illinoinensis HOM05D008362 ORTHO05D010554 4.2e-62 241.5 153 100.0
QL09p049939 Quercus lobata HOM05D008362 ORTHO05D010554 2.0e-24 116.3 99 65.7
Haze_03348 Corylus avellana HOM05D008362 ORTHO05D010554 2.1e-21 106.3 102 62.7
MD05G1169400 Malus domestica HOM05D008362 ORTHO05D010554 3.2e-17 92.4 156 50.0
FAN24G1934 Fragaria x ananassa HOM05D008362 ORTHO05D010554 1.3e-15 87.0 146 48.6
FAN15G1847 Fragaria x ananassa HOM05D008362 ORTHO05D010554 1.9e-14 83.2 160 55.0
GSVIVG01006384001 Vitis vinifera HOM05D008362 ORTHO05D010554 1.2e-13 80.5 83 59.0
Manes.13G051000 Manihot esculenta HOM05D008362 ORTHO05D010554 4.7e-13 78.6 84 58.3
COL.COLO4_16103 Corchorus olitorius HOM05D008362 ORTHO05D010554 6.8e-12 74.7 74 59.5
CSS0045887 Camellia sinensis var. sinensis HOM05D008362 ORTHO05D010554 1.2e-11 73.9 81 58.0
Gohir.A07G092300 Gossypium hirsutum HOM05D008362 ORTHO05D010554 3.4e-11 72.4 64 65.6
PGSC0003DMG400020171 Solanum tuberosum HOM05D008362 ORTHO05D010554 7.6e-11 71.2 99 47.5
arahy.Tifrunner.gnm1.ann1.L802W9 Arachis hypogaea HOM05D008362 ORTHO05D010554 1.3e-10 70.5 84 56.0
CANSAT01G1703 Cannabis sativa HOM05D008362 ORTHO05D010554 1.7e-10 70.1 95 50.5
Lj1C90G7 Lonicera japonica HOM05D006751 ORTHO05D008710 2.2e-10 69.7 84 51.2
Nitab4.5_0002671g0030 Nicotiana tabacum HOM05D008362 ORTHO05D010554 2.9e-10 69.3 89 46.1
Medtr8g012580 Medicago truncatula HOM05D008362 ORTHO05D010554 3.8e-10 68.9 53 73.6
Nitab4.5_0003020g0140 Nicotiana tabacum HOM05D008362 ORTHO05D010554 4.9e-10 68.6 86 46.5
Gohir.D07G096800 Gossypium hirsutum HOM05D008362 ORTHO05D010554 1.1e-09 67.4 64 64.1
Gorai.001G104200 Gossypium raimondii HOM05D008362 ORTHO05D010554 1.4e-09 67.0 64 62.5
VMungo0331G0307 Vigna mungo HOM05D008362 ORTHO05D010554 1.4e-09 67.0 52 73.1
MSTRG.20975 Avicennia marina HOM05D008362 ORTHO05D010554 1.9e-09 66.6 85 50.6
TPR.G28197 Trifolium pratense HOM05D008362 ORTHO05D010554 2.4e-09 66.2 50 82.0
Sopen06g034630 Solanum pennellii HOM05D008362 ORTHO05D010554 5.4e-09 65.1 91 48.4
Sabra02G0188000 Salix brachista HOM05D008362 ORTHO05D010554 7.1e-09 64.7 79 50.6
TWI18G0011 Tripterygium wilfordii HOM05D008362 ORTHO05D010554 7.1e-09 64.7 106 45.3
Hma1.2p1_0226F.1_g095250 Hydrangea macrophylla HOM05D008362 ORTHO05D010554 9.2e-09 64.3 40 82.5
Lalb_Chr07g0194111 Lupinus albus HOM05D008362 ORTHO05D010554 9.2e-09 64.3 48 83.3
Phvul.010G022800 Phaseolus vulgaris HOM05D008362 ORTHO05D010554 1.2e-08 63.9 55 72.7
Thecc.01G217300 Theobroma cacao HOM05D008362 ORTHO05D010554 1.2e-08 63.9 78 53.8
Cfa021480 Carpinus fangiana HOM05D008362 ORTHO05D010554 1.6e-08 63.5 34 100.0
Psat4g204280 Pisum sativum HOM05D008362 ORTHO05D010554 2.1e-08 63.2 39 89.7
Lj3g0027645 Lotus japonicus HOM05D008362 ORTHO05D010554 2.7e-08 62.8 49 77.6
Potri.002G246900 Populus trichocarpa HOM05D008362 ORTHO05D010554 2.7e-08 62.8 94 44.7
Duzib211G0336 Durio zibethinus HOM05D008362 ORTHO05D010554 3.5e-08 62.4 158 49.4
Prupe.8G196600 Prunus persica HOM05D008362 ORTHO05D010554 3.5e-08 62.4 154 46.8
PGR083G0575 Punica granatum HOM05D008362 ORTHO05D010554 4.6e-08 62.0 61 60.7
Glyma.16G089400 Glycine max HOM05D008362 ORTHO05D010554 1.0e-07 60.8 40 85.0
FAN27G1021 Fragaria x ananassa HOM05D008362 ORTHO05D010554 1.7e-07 60.1 55 67.3
Nn3g20067 Nelumbo nucifera HOM05D008362 ORTHO05D010554 1.7e-07 60.1 81 51.9
Ciclev10024415m.g Citrus clementina HOM05D008362 ORTHO05D010554 2.3e-07 59.7 42 71.4
HanXRQChr06g0172231 Helianthus annuus HOM05D008362 ORTHO05D010554 3.0e-07 59.3 83 44.6
Hund05585 Selenicereus undatus HOM05D008362 ORTHO05D010554 3.9e-07 58.9 42 76.2
Sc17g0002020 Simmondsia chinensis HOM05D008362 ORTHO05D010554 3.9e-07 58.9 42 69.0
Ca_23217_v3 Cicer arietinum L. HOM05D008362 ORTHO05D010554 5.1e-07 58.5 50 76.0
Atru.chr6.1443 Acer truncatum HOM05D008362 ORTHO05D010554 1.5e-06 57.0 82 50.0
vmacro02790 Vaccinium macrocarpon HOM05D008362 ORTHO05D010554 2.5e-06 56.2 46 56.5
Solyc06g083250.4 Solanum lycopersicum HOM05D008362 ORTHO05D010554 3.3e-06 55.8 36 75.0
Cc01_g16550 Coffea canephora HOM05D008362 ORTHO05D010554 5.6e-06 55.1 33 81.8


User provided reference genes

Program Settings