Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 5.5e-257 890.6 487 100.0
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 4.4e-137 492.3 497 58.4
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 1.4e-135 487.3 501 63.1
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 9.8e-121 438.0 495 56.0
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 2.8e-83 313.5 487 44.8
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 3.2e-79 300.1 495 41.8
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 4.6e-78 296.2 488 42.8
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 1.0e-77 295.0 409 46.9
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 5.1e-77 292.7 419 48.7
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 3.3e-76 290.0 490 40.4
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 1.3e-75 288.1 491 42.4
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 1.4e-74 284.6 421 46.8
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 1.4e-74 284.6 503 44.3
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 4.5e-73 279.6 493 44.8
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 5.4e-71 272.7 493 44.2
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 1.0e-69 268.5 441 42.2
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.0e-69 268.5 496 43.1
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 5.1e-69 266.2 371 46.4
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 2.5e-68 263.8 496 40.3
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 2.5e-68 263.8 508 39.8
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 2.5e-68 263.8 504 39.1
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 9.6e-68 261.9 490 43.5
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 1.3e-67 261.5 418 44.3
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 3.7e-67 260.0 428 44.9
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 2.4e-66 257.3 491 39.7
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 2.0e-65 254.2 503 39.6
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 2.0e-65 254.2 421 43.9
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 1.4e-63 248.1 505 39.0
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 1.6e-62 244.6 423 42.1
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 7.9e-62 242.3 419 41.8
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 9.6e-60 235.3 587 33.6
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 9.6e-60 235.3 515 39.2
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 2.8e-59 233.8 414 41.8
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 4.0e-58 229.9 586 33.6
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 2.6e-57 227.3 515 34.2
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 2.6e-57 227.3 315 47.6
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 5.8e-57 226.1 499 39.3
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 5.8e-57 226.1 411 40.9
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 7.6e-57 225.7 335 45.1
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 1.0e-56 225.3 308 48.1
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.3e-56 224.9 438 44.1
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.7e-56 224.6 281 50.9
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.7e-56 224.6 437 39.8
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 2.9e-56 223.8 447 40.0
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 4.9e-56 223.0 437 41.0
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 1.1e-55 221.9 511 37.8
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 5.5e-55 219.5 489 38.4
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 5.5e-55 219.5 477 40.9
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 9.3e-55 218.8 489 38.9
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 2.7e-54 217.2 500 38.0
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 1.8e-53 214.5 424 39.9
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 2.5e-52 210.7 437 42.6
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 5.7e-52 209.5 398 45.2
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 9.7e-52 208.8 419 43.0
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 6.3e-51 206.1 364 41.2
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 1.1e-50 205.3 433 42.0
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 1.4e-50 204.9 441 38.1
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 1.4e-50 204.9 375 41.3
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.4e-50 204.9 557 36.3
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.4e-50 204.1 400 38.0
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 2.4e-50 204.1 441 42.4
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 4.1e-50 203.4 384 40.1
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 2.2e-48 197.6 236 50.0
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 2.9e-48 197.2 364 42.0
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 1.9e-47 194.5 393 39.2
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 2.7e-46 190.7 365 39.2
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 4.6e-46 189.9 518 37.5
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 6.1e-46 189.5 414 35.7
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 2.3e-45 187.6 270 44.1
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 3.0e-45 187.2 440 35.0
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 8.8e-45 185.7 392 38.5
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 3.7e-43 180.3 467 34.5
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 6.3e-43 179.5 398 35.2
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 1.4e-42 178.3 402 36.1
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 1.8e-42 177.9 208 50.5
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 3.1e-42 177.2 426 37.3
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 4.1e-42 176.8 419 38.7
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 1.5e-41 174.9 246 46.3
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 4.5e-41 173.3 429 36.6
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 7.7e-41 172.6 311 39.5
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 1.7e-40 171.4 343 36.4
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 3.8e-40 170.2 359 38.4
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 3.8e-40 170.2 404 35.1
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 1.4e-39 168.3 439 35.3
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 4.2e-39 166.8 442 34.6
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 3.0e-37 160.6 471 33.8
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 7.4e-36 156.0 234 44.9
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 9.7e-36 155.6 344 36.6
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 3.7e-35 153.7 536 31.5
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 1.8e-34 151.4 512 35.7
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 1.8e-34 151.4 407 33.4
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 2.4e-34 151.0 236 43.6
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 2.6e-33 147.5 365 33.7
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 2.6e-33 147.5 393 34.9
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 4.5e-33 146.7 437 32.5
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 6.5e-32 142.9 429 32.4
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 1.1e-31 142.1 363 36.6
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 7.2e-31 139.4 199 43.2
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 3.9e-29 133.7 242 38.0
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 2.7e-22 110.9 213 37.1
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 2.2e-19 101.3 402 29.1
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 2.7e-14 84.3 505 26.3
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 4.0e-13 80.5 300 29.0
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 1.7e-11 75.1 173 33.5
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 2.8e-11 74.3 264 26.1
BcaB05g23323 Brassica carinata HOM05D006718 ORTHO05D008492 7.0e-10 69.7 129 35.7
CSS0030010 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 5.5e-07 60.1 99 39.4


User provided reference genes

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