Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 8.9e-119 430.3 213 100.0
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.1e-81 307.0 205 72.2
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 1.0e-77 293.9 181 77.9
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 1.0e-77 293.9 198 74.7
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 2.2e-77 292.7 222 70.7
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.9e-76 289.7 179 77.1
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 4.2e-76 288.5 178 75.8
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 2.1e-75 286.2 211 70.1
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 3.5e-75 285.4 213 69.0
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 6.1e-75 284.6 191 72.8
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 7.9e-75 284.3 178 75.3
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 3.9e-74 282.0 175 75.4
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 3.9e-74 282.0 206 68.4
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 5.1e-74 281.6 176 76.1
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 2.5e-73 279.3 178 74.7
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 7.4e-73 277.7 177 75.7
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 9.7e-73 277.3 216 67.6
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 2.8e-72 275.8 181 72.9
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 8.2e-72 274.2 178 74.2
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 1.8e-71 273.1 206 66.5
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 1.2e-70 270.4 175 74.9
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 2.6e-70 269.2 189 67.7
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 5.9e-70 268.1 167 76.6
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 1.7e-69 266.5 207 66.7
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 1.7e-69 266.5 173 74.0
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 3.8e-69 265.4 178 71.9
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 3.8e-69 265.4 180 70.0
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 1.9e-68 263.1 173 72.8
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 2.5e-68 262.7 173 72.3
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 2.5e-68 262.7 178 70.8
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 2.5e-68 262.7 195 68.2
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 4.2e-68 261.9 198 67.7
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 5.5e-68 261.5 195 67.7
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 7.2e-68 261.2 180 71.7
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 7.2e-68 261.2 174 72.4
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 2.1e-67 259.6 182 68.1
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 6.1e-67 258.1 169 72.2
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 6.1e-67 258.1 169 71.6
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 2.3e-66 256.1 176 67.6
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 2.3e-66 256.1 181 68.0
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 3.9e-66 255.4 188 68.1
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 6.7e-66 254.6 184 67.4
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 8.8e-66 254.2 173 71.1
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 8.8e-66 254.2 186 67.2
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 1.3e-64 250.4 177 68.4
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 1.3e-64 250.4 185 68.1
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 1.7e-64 250.0 177 68.4
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 1.7e-64 250.0 177 68.4
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 2.8e-64 249.2 189 65.1
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 4.8e-64 248.4 180 67.8
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 8.2e-64 247.7 188 62.8
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 1.4e-63 246.9 157 73.2
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 1.8e-63 246.5 177 67.2
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 1.8e-63 246.5 177 67.2
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 2.4e-63 246.1 167 70.7
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 2.4e-63 246.1 180 67.2
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 2.4e-63 246.1 180 66.7
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 3.1e-63 245.7 174 67.8
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 5.3e-63 245.0 179 67.0
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 5.3e-63 245.0 179 65.9
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 5.3e-63 245.0 163 69.3
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 1.5e-62 243.4 174 66.1
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 2.6e-62 242.7 179 67.0
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 4.5e-62 241.9 174 67.2
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 4.5e-62 241.9 173 68.2
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 7.7e-62 241.1 188 64.9
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 7.7e-62 241.1 212 59.9
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 1.3e-61 240.4 180 66.7
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 3.8e-61 238.8 175 67.4
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 3.8e-61 238.8 177 65.5
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 6.5e-61 238.0 165 69.7
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 1.9e-60 236.5 177 65.5
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 4.2e-60 235.3 203 59.6
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 5.5e-60 235.0 155 70.3
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 7.2e-60 234.6 174 65.5
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 7.2e-60 234.6 178 64.0
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 9.4e-60 234.2 182 65.4
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 1.2e-59 233.8 178 65.2
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 1.6e-59 233.4 181 61.9
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 2.1e-59 233.0 155 70.3
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 2.1e-59 233.0 181 64.6
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 4.7e-59 231.9 251 50.6
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 1.4e-58 230.3 155 68.4
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 9.7e-57 224.2 154 68.8
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 4.8e-56 221.9 152 66.4
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 1.8e-55 219.9 149 73.2
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.6e-54 216.9 133 78.2
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 5.2e-50 201.8 149 65.1
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 1.5e-49 200.3 139 69.1
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 5.7e-49 198.4 137 70.1
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 1.7e-48 196.8 151 62.9
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.1e-47 194.1 159 58.5
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 4.1e-47 192.2 154 61.0
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 2.9e-45 186.0 120 72.5
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.5e-44 183.7 154 58.4
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.5e-44 183.0 155 59.4
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 9.4e-44 181.0 155 58.1
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.4e-42 177.2 126 67.5
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.4e-39 166.4 152 57.9
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 9.8e-33 144.4 191 46.1
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.8e-32 142.9 119 59.7
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 6.1e-27 125.2 83 67.5
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 1.0e-26 124.4 80 76.2
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 3.1e-18 96.3 106 51.9
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 3.4e-17 92.8 146 38.4
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 1.2e-14 84.3 90 57.8
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 5.2e-10 68.9 119 34.5
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 3.2e-07 59.7 52 51.9


User provided reference genes

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