Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G042400 Carya illinoinensis HOM05D009864 ORTHO05D010207 3.5e-86 321.6 168 100.0
CiPaw.13G042300 Carya illinoinensis HOM05D009864 ORTHO05D010207 4.9e-72 274.6 168 89.9
CiPaw.13G042000 Carya illinoinensis HOM05D009864 ORTHO05D010207 4.3e-60 235.0 169 81.1
CiPaw.13G041800 Carya illinoinensis HOM05D009864 ORTHO05D010207 3.9e-45 185.3 131 81.7
CiPaw.11G071500 Carya illinoinensis HOM05D009864 ORTHO05D010207 3.3e-44 182.2 161 70.8
CiPaw.11G089000 Carya illinoinensis HOM05D009864 ORTHO05D010207 5.5e-31 138.3 154 55.8
CiPaw.04G127000 Carya illinoinensis HOM05D009864 ORTHO05D010207 2.2e-27 126.3 147 57.8
CiPaw.11G088600 Carya illinoinensis HOM05D009864 ORTHO05D010207 2.2e-27 126.3 155 51.6
CiPaw.11G071400 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.2e-25 120.6 164 47.0
CiPaw.11G089100 Carya illinoinensis HOM05D009864 ORTHO05D010207 2.7e-25 119.4 155 51.0
CiPaw.11G071300 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.6e-22 110.2 154 50.0
Cfa012385 Carpinus fangiana HOM05D009864 ORTHO05D010207 8.3e-19 97.8 149 43.6
Dinv00163 Davidia involucrata HOM05D009932 ORTHO05D010207 5.4e-18 95.1 161 37.9
Cfa012398 Carpinus fangiana HOM05D009864 ORTHO05D010207 4.3e-15 85.5 147 39.5
Haze_08352 Corylus avellana HOM05D009864 ORTHO05D010207 2.3e-13 79.7 165 40.6
Rhsim05G0045300 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.5e-12 77.0 159 35.2
Cfa003219 Carpinus fangiana HOM05D009864 ORTHO05D010207 9.8e-12 74.3 106 45.3
RhsimUnG0132000 Rhododendron simsii HOM05D009932 ORTHO05D010207 9.8e-12 74.3 114 37.7
Cfa012342 Carpinus fangiana HOM05D009864 ORTHO05D010207 2.2e-11 73.2 164 37.8
Cfa012340 Carpinus fangiana HOM05D009864 ORTHO05D010207 6.4e-11 71.6 147 38.8
RhsimUnG0170600 Rhododendron simsii HOM05D009932 ORTHO05D010207 4.1e-10 68.9 161 32.9
Thecc.02G332400 Theobroma cacao HOM05D011256 ORTHO05D010207 1.6e-09 67.0 162 34.0
Thecc.02G337400 Theobroma cacao HOM05D011256 ORTHO05D010207 1.6e-09 67.0 161 35.4
Dinv25145 Davidia involucrata HOM05D009864 ORTHO05D010207 2.0e-09 66.6 138 37.0
Rhsim05G0046200 Rhododendron simsii HOM05D009932 ORTHO05D010207 2.0e-09 66.6 162 30.9
Cfa012344 Carpinus fangiana HOM05D009864 ORTHO05D010207 2.7e-09 66.2 153 35.3
Haze_08355 Corylus avellana HOM05D009864 ORTHO05D010207 3.5e-09 65.9 166 36.7
Cfa021297 Carpinus fangiana HOM05D009864 ORTHO05D010207 5.0e-08 62.0 115 34.8
Dinv28886 Davidia involucrata HOM05D009932 ORTHO05D010207 8.6e-08 61.2 163 31.3
Cfa012345 Carpinus fangiana HOM05D009864 ORTHO05D010207 1.1e-07 60.8 164 36.6
Dinv25149 Davidia involucrata HOM05D010247 ORTHO05D012515 1.1e-07 60.8 115 34.8
RhsimUnG0170500 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.5e-07 60.5 155 31.0
Gorai.009G189000 Gossypium raimondii HOM05D011256 ORTHO05D010207 1.9e-07 60.1 168 29.8
COL.COLO4_27947 Corchorus olitorius HOM05D011256 ORTHO05D010207 2.5e-07 59.7 161 31.7
Thecc.03G238300 Theobroma cacao HOM05D022011 ORTHO05D025716 2.5e-07 59.7 113 35.4
Rhsim05G0045900 Rhododendron simsii HOM05D009932 ORTHO05D010207 4.3e-07 58.9 146 30.8
Cfa012343 Carpinus fangiana HOM05D009864 ORTHO05D010207 7.3e-07 58.2 166 36.1
Rhsim09G0105700 Rhododendron simsii HOM05D009932 ORTHO05D010207 9.5e-07 57.8 113 35.4
COL.COLO4_06690 Corchorus olitorius HOM05D021980 ORTHO05D010207 1.2e-06 57.4 163 32.5
Gorai.013G091000 Gossypium raimondii HOM05D011256 ORTHO05D010207 1.2e-06 57.4 153 30.7
Thecc.02G337900 Theobroma cacao HOM05D011256 ORTHO05D010207 1.2e-06 57.4 84 42.9
RhsimUnG0140400 Rhododendron simsii HOM05D009932 ORTHO05D010207 2.1e-06 56.6 146 30.8
Gohir.D13G079600 Gossypium hirsutum HOM05D011256 ORTHO05D010207 2.8e-06 56.2 153 30.7
Gohir.D13G079650 Gossypium hirsutum HOM05D011256 ORTHO05D010207 2.8e-06 56.2 153 30.7


User provided reference genes

Program Settings