Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G042300 Carya illinoinensis HOM05D009864 ORTHO05D010207 9.5e-84 313.5 166 100.0
CiPaw.13G042400 Carya illinoinensis HOM05D009864 ORTHO05D010207 8.3e-72 273.9 168 89.9
CiPaw.13G042000 Carya illinoinensis HOM05D009864 ORTHO05D010207 3.5e-62 241.9 167 83.8
CiPaw.13G041800 Carya illinoinensis HOM05D009864 ORTHO05D010207 5.3e-50 201.4 129 89.1
CiPaw.11G071500 Carya illinoinensis HOM05D009864 ORTHO05D010207 2.0e-49 199.5 163 76.1
CiPaw.11G089000 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.2e-33 147.1 154 59.1
CiPaw.11G088600 Carya illinoinensis HOM05D009864 ORTHO05D010207 4.2e-31 138.7 165 54.5
CiPaw.11G071400 Carya illinoinensis HOM05D009864 ORTHO05D010207 6.0e-30 134.8 168 50.6
CiPaw.04G127000 Carya illinoinensis HOM05D009864 ORTHO05D010207 3.7e-27 125.6 147 59.2
CiPaw.11G089100 Carya illinoinensis HOM05D009864 ORTHO05D010207 3.7e-27 125.6 165 52.7
CiPaw.11G071300 Carya illinoinensis HOM05D009864 ORTHO05D010207 7.6e-25 117.9 154 53.2
Cfa012385 Carpinus fangiana HOM05D009864 ORTHO05D010207 9.0e-18 94.4 152 43.4
Dinv00163 Davidia involucrata HOM05D009932 ORTHO05D010207 2.0e-17 93.2 161 39.8
Cfa012398 Carpinus fangiana HOM05D009864 ORTHO05D010207 2.2e-16 89.7 152 40.8
Haze_08352 Corylus avellana HOM05D009864 ORTHO05D010207 8.8e-13 77.8 169 40.2
Rhsim05G0045300 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.5e-12 77.0 161 33.5
COL.COLO4_27947 Corchorus olitorius HOM05D011256 ORTHO05D010207 9.7e-12 74.3 167 33.5
Cfa003219 Carpinus fangiana HOM05D009864 ORTHO05D010207 1.3e-11 73.9 130 42.3
Cfa012342 Carpinus fangiana HOM05D009864 ORTHO05D010207 2.8e-11 72.8 169 36.1
Cfa012340 Carpinus fangiana HOM05D009864 ORTHO05D010207 4.8e-11 72.0 147 38.1
Dinv25145 Davidia involucrata HOM05D009864 ORTHO05D010207 1.1e-10 70.9 146 37.0
Gorai.009G189000 Gossypium raimondii HOM05D011256 ORTHO05D010207 1.1e-10 70.9 171 31.6
RhsimUnG0132000 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.4e-10 70.5 161 32.9
Haze_08355 Corylus avellana HOM05D009864 ORTHO05D010207 1.8e-10 70.1 169 38.5
Thecc.02G337400 Theobroma cacao HOM05D011256 ORTHO05D010207 2.4e-10 69.7 159 34.6
RhsimUnG0170600 Rhododendron simsii HOM05D009932 ORTHO05D010207 3.1e-10 69.3 154 32.5
Thecc.02G332400 Theobroma cacao HOM05D011256 ORTHO05D010207 4.1e-10 68.9 160 35.0
Dinv28886 Davidia involucrata HOM05D009932 ORTHO05D010207 6.9e-10 68.2 161 32.9
Rhsim05G0046200 Rhododendron simsii HOM05D009932 ORTHO05D010207 6.9e-10 68.2 147 31.3
Cfa012344 Carpinus fangiana HOM05D009864 ORTHO05D010207 2.6e-09 66.2 157 35.7
Cfa012345 Carpinus fangiana HOM05D009864 ORTHO05D010207 7.7e-09 64.7 153 38.6
Cfa021297 Carpinus fangiana HOM05D009864 ORTHO05D010207 1.0e-08 64.3 115 35.7
Cfa012343 Carpinus fangiana HOM05D009864 ORTHO05D010207 3.8e-08 62.4 153 39.9
COL.COLO4_06690 Corchorus olitorius HOM05D021980 ORTHO05D010207 3.8e-08 62.4 171 33.3
RhsimUnG0170500 Rhododendron simsii HOM05D009932 ORTHO05D010207 3.8e-08 62.4 166 30.7
Gorai.013G091000 Gossypium raimondii HOM05D011256 ORTHO05D010207 1.1e-07 60.8 153 32.7
Rhsim09G0105700 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.4e-07 60.5 113 36.3
Gohir.D13G079600 Gossypium hirsutum HOM05D011256 ORTHO05D010207 2.5e-07 59.7 153 32.7
Gohir.D13G079650 Gossypium hirsutum HOM05D011256 ORTHO05D010207 2.5e-07 59.7 153 32.7
Dinv25149 Davidia involucrata HOM05D010247 ORTHO05D012515 3.2e-07 59.3 112 35.7
Gohir.A05G180701 Gossypium hirsutum HOM05D011256 ORTHO05D010207 4.2e-07 58.9 149 31.5
Gohir.A03G003650 Gossypium hirsutum HOM05D021980 ORTHO05D010207 5.5e-07 58.5 170 29.4
Thecc.02G337900 Theobroma cacao HOM05D011256 ORTHO05D010207 5.5e-07 58.5 67 49.3
Gorai.013G090400 Gossypium raimondii HOM05D011256 ORTHO05D010207 9.4e-07 57.8 161 33.5
Thecc.03G238300 Theobroma cacao HOM05D022011 ORTHO05D025716 9.4e-07 57.8 113 36.3
Rhsim05G0040700 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.2e-06 57.4 91 37.4
Rhsim05G0045900 Rhododendron simsii HOM05D009932 ORTHO05D010207 2.7e-06 56.2 145 31.0
CiPaw.14G108100 Carya illinoinensis HOM05D009864 ORTHO05D010207 3.6e-06 55.8 131 32.8
Gorai.013G091100 Gossypium raimondii HOM05D011256 ORTHO05D010207 6.1e-06 55.1 138 34.1


User provided reference genes

Program Settings