Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G042000 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.0e-80 303.5 171 100.0
CiPaw.13G042300 Carya illinoinensis HOM05D009864 ORTHO05D010207 3.3e-63 245.4 167 83.8
CiPaw.13G042400 Carya illinoinensis HOM05D009864 ORTHO05D010207 6.8e-61 237.7 169 81.1
CiPaw.13G041800 Carya illinoinensis HOM05D009864 ORTHO05D010207 2.2e-43 179.5 132 78.8
CiPaw.11G071500 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.4e-42 176.8 161 68.3
CiPaw.11G089000 Carya illinoinensis HOM05D009864 ORTHO05D010207 4.3e-31 138.7 157 56.1
CiPaw.11G088600 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.3e-27 127.1 164 51.8
CiPaw.11G089100 Carya illinoinensis HOM05D009864 ORTHO05D010207 2.4e-26 122.9 164 51.2
CiPaw.11G071400 Carya illinoinensis HOM05D009864 ORTHO05D010207 6.0e-25 118.2 165 46.1
CiPaw.04G127000 Carya illinoinensis HOM05D009864 ORTHO05D010207 3.9e-24 115.5 148 52.7
CiPaw.11G071300 Carya illinoinensis HOM05D009864 ORTHO05D010207 1.6e-17 93.6 162 46.9
Cfa012385 Carpinus fangiana HOM05D009864 ORTHO05D010207 1.9e-15 86.7 160 38.1
Dinv00163 Davidia involucrata HOM05D009932 ORTHO05D010207 1.6e-14 83.6 179 34.6
Cfa012398 Carpinus fangiana HOM05D009864 ORTHO05D010207 1.1e-13 80.9 154 38.3
Haze_08352 Corylus avellana HOM05D009864 ORTHO05D010207 1.4e-13 80.5 168 36.9
Rhsim05G0045300 Rhododendron simsii HOM05D009932 ORTHO05D010207 5.3e-13 78.6 177 31.1
Cfa012342 Carpinus fangiana HOM05D009864 ORTHO05D010207 2.6e-12 76.3 167 34.1
Haze_08355 Corylus avellana HOM05D009864 ORTHO05D010207 3.8e-11 72.4 168 41.1
RhsimUnG0132000 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.4e-10 70.5 177 30.5
RhsimUnG0170600 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.4e-10 70.5 169 31.4
Thecc.02G337400 Theobroma cacao HOM05D011256 ORTHO05D010207 4.2e-10 68.9 160 38.8
Cfa012340 Carpinus fangiana HOM05D009864 ORTHO05D010207 9.3e-10 67.8 155 36.8
Cfa012344 Carpinus fangiana HOM05D009864 ORTHO05D010207 9.3e-10 67.8 171 35.7
Dinv25145 Davidia involucrata HOM05D009864 ORTHO05D010207 1.6e-09 67.0 167 33.5
Cfa003219 Carpinus fangiana HOM05D009864 ORTHO05D010207 3.5e-09 65.9 100 44.0
Rhsim05G0046200 Rhododendron simsii HOM05D009932 ORTHO05D010207 6.1e-09 65.1 110 35.5
Thecc.02G332400 Theobroma cacao HOM05D011256 ORTHO05D010207 6.1e-09 65.1 159 31.4
COL.COLO4_27947 Corchorus olitorius HOM05D011256 ORTHO05D010207 1.0e-08 64.3 168 33.3
Dinv28886 Davidia involucrata HOM05D009932 ORTHO05D010207 2.3e-08 63.2 168 35.7
Cfa012345 Carpinus fangiana HOM05D009864 ORTHO05D010207 3.0e-08 62.8 157 34.4
Thecc.03G238300 Theobroma cacao HOM05D022011 ORTHO05D025716 6.7e-08 61.6 117 35.0
Cfa012343 Carpinus fangiana HOM05D009864 ORTHO05D010207 8.7e-08 61.2 169 34.3
RhsimUnG0170500 Rhododendron simsii HOM05D009932 ORTHO05D010207 8.7e-08 61.2 161 30.4
Cfa021297 Carpinus fangiana HOM05D009864 ORTHO05D010207 2.5e-07 59.7 122 32.8
Thecc.02G337900 Theobroma cacao HOM05D011256 ORTHO05D010207 4.3e-07 58.9 85 42.4
Rhsim09G0105700 Rhododendron simsii HOM05D009932 ORTHO05D010207 5.7e-07 58.5 172 29.1
Rhsim05G0040700 Rhododendron simsii HOM05D009932 ORTHO05D010207 1.3e-06 57.4 85 35.3
COL.COLO4_06690 Corchorus olitorius HOM05D021980 ORTHO05D010207 1.6e-06 57.0 168 31.5
Gorai.009G189000 Gossypium raimondii HOM05D011256 ORTHO05D010207 4.8e-06 55.5 170 29.4


User provided reference genes

Program Settings