Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G041100 Carya illinoinensis HOM05D007506 ORTHO05D008409 8.1e-19 96.7 74 100.0
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 1.8e-10 68.9 37 89.2
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 5.3e-10 67.4 72 62.5
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 5.3e-10 67.4 37 86.5
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 6.9e-10 67.0 78 52.6
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 1.2e-09 66.2 37 86.5
Cpa.g.sc54.9 Carica papaya HOM05D007506 ORTHO05D008409 3.4e-09 64.7 37 83.8
MD07G1070900 Malus domestica HOM05D007506 ORTHO05D008409 7.6e-09 63.5 71 62.0
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 1.3e-08 62.8 37 83.8
Potri.008G016801 Populus trichocarpa HOM05D007506 ORTHO05D008409 1.7e-08 62.4 37 78.4
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 1.7e-08 62.4 37 81.1
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 4.9e-08 60.8 37 81.1
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 4.9e-08 60.8 37 75.7
CANSAT56G4328 Cannabis sativa HOM05D007506 ORTHO05D008409 8.4e-08 60.1 37 73.0
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 8.4e-08 60.1 37 81.1
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 1.1e-07 59.7 40 80.0
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 1.1e-07 59.7 37 78.4
TWI38G1985 Tripterygium wilfordii HOM05D007506 ORTHO05D008409 1.4e-07 59.3 37 75.7
TAR633G2594 Trochodendron aralioides HOM05D007506 ORTHO05D008409 1.4e-07 59.3 37 75.7
QL04p046828 Quercus lobata HOM05D007506 ORTHO05D008409 3.2e-07 58.2 71 64.8
CDE12G0642 Ceratophyllum demersum HOM05D007506 ORTHO05D008409 9.3e-07 56.6 37 73.0
MBI17_g08330_MAGBIO Magnolia biondii HOM05D007506 ORTHO05D008409 9.3e-07 56.6 37 70.3
Os02g0533800 Oryza sativa ssp. japonica HOM05D007506 ORTHO05D008409 1.2e-06 56.2 37 73.0
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 1.6e-06 55.8 37 70.3
GSVIVG01010679001 Vitis vinifera HOM05D007506 ORTHO05D008409 1.6e-06 55.8 33 81.8
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 2.1e-06 55.5 35 77.1
FvH4_7g05151 Fragaria vesca HOM05D007506 ORTHO05D008409 2.7e-06 55.1 71 46.5
FAN05G5073 Fragaria x ananassa HOM05D007506 ORTHO05D008409 2.7e-06 55.1 30 80.0
FAN08G2571 Fragaria x ananassa HOM05D007506 ORTHO05D008409 2.7e-06 55.1 30 80.0
FAN28G2052 Fragaria x ananassa HOM05D007506 ORTHO05D008409 2.7e-06 55.1 30 80.0
Sabra10G0188200 Salix brachista HOM05D007506 ORTHO05D008409 3.5e-06 54.7 32 81.2
Manes.10G062500 Manihot esculenta HOM05D007506 ORTHO05D008409 4.6e-06 54.3 37 75.7
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 6.0e-06 53.9 35 74.3
ClCG08G008330 Citrullus lanatus HOM05D007506 ORTHO05D008409 7.9e-06 53.5 32 78.1
MELO3C019903.2 Cucumis melo HOM05D007506 ORTHO05D008409 7.9e-06 53.5 32 78.1
CsaV3_6G004310 Cucumis sativus L. HOM05D007506 ORTHO05D008409 7.9e-06 53.5 32 78.1
MD11G1004700 Malus domestica HOM05D007506 ORTHO05D008409 7.9e-06 53.5 36 75.0
SalBow3G3829 Salvia bowleyana HOM05D007506 ORTHO05D008409 7.9e-06 53.5 37 70.3
unitig_899.g14468 Utricularia gibba HOM05D007506 ORTHO05D008409 7.9e-06 53.5 37 70.3
HPP92_013812 Vanilla planifolia HOM05D007506 ORTHO05D008409 7.9e-06 53.5 30 80.0


User provided reference genes

Program Settings