Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G028600 Carya illinoinensis HOM05D006948 ORTHO05D008703 6.5e-48 193.7 98 100.0
Cfa012992 Carpinus fangiana HOM05D006948 ORTHO05D008703 1.4e-34 149.4 97 78.4
Thecc.01G389700 Theobroma cacao HOM05D006948 ORTHO05D008703 7.9e-30 133.7 102 69.6
Duzib138G1111 Durio zibethinus HOM05D006948 ORTHO05D008703 1.4e-29 132.9 102 66.7
COL.COLO4_12436 Corchorus olitorius HOM05D006948 ORTHO05D008703 1.8e-29 132.5 103 66.0
TWI59G0066 Tripterygium wilfordii HOM05D006948 ORTHO05D008703 6.7e-29 130.6 84 75.0
CsaV3_3G007550 Cucumis sativus L. HOM05D006948 ORTHO05D008703 9.7e-28 126.7 97 64.9
Thecc.01G390200 Theobroma cacao HOM05D006948 ORTHO05D008703 3.7e-27 124.8 102 63.7
Gorai.004G039500 Gossypium raimondii HOM05D006948 ORTHO05D008703 6.3e-27 124.0 85 70.6
Gohir.A08G029800 Gossypium hirsutum HOM05D006948 ORTHO05D008703 1.1e-26 123.2 102 61.8
Gohir.D08G040600 Gossypium hirsutum HOM05D006948 ORTHO05D008703 3.1e-26 121.7 85 69.4
Ciclev10023020m.g Citrus clementina HOM05D006948 ORTHO05D008703 4.1e-26 121.3 92 65.2
MSTRG.28159 Avicennia marina HOM05D006948 ORTHO05D008703 9.1e-26 120.2 101 62.4
Manes.05G052600 Manihot esculenta HOM05D006948 ORTHO05D008703 1.2e-25 119.8 94 63.8
Cpa.g.sc5.223 Carica papaya HOM05D006948 ORTHO05D008703 3.5e-25 118.2 96 58.3
Ca_27396_v3 Cicer arietinum L. HOM05D006948 ORTHO05D008703 1.0e-24 116.7 95 62.1
Haze_02785 Corylus avellana HOM05D006948 ORTHO05D008703 1.0e-24 116.7 77 75.3
CANSAT21G1424 Cannabis sativa HOM05D006948 ORTHO05D008703 1.3e-24 116.3 97 62.9
AUR62023432 Chenopodium quinoa HOM05D006948 ORTHO05D008703 2.9e-24 115.2 82 64.6
Haze_02790 Corylus avellana HOM05D006948 ORTHO05D008703 2.9e-24 115.2 73 78.1
Hund17076 Selenicereus undatus HOM05D006948 ORTHO05D008703 5.0e-24 114.4 79 70.9
Cc00_g20460 Coffea canephora HOM05D006948 ORTHO05D008703 1.1e-23 113.2 102 56.9
Medtr7g446140 Medicago truncatula HOM05D006948 ORTHO05D008703 1.5e-23 112.8 93 62.4
AL5G42750 Arabidopsis lyrata HOM05D006948 ORTHO05D008703 2.5e-23 112.1 105 53.3
VMungo1383G1377 Vigna mungo HOM05D006948 ORTHO05D008703 3.2e-23 111.7 83 61.4
AT3G60480 Arabidopsis thaliana HOM05D006948 ORTHO05D008703 5.5e-23 110.9 85 60.0
Aa31LG10G14620 Aethionema arabicum HOM05D006948 ORTHO05D008703 9.4e-23 110.2 80 66.2
Carub.0005s2721 Capsella rubella HOM05D006948 ORTHO05D008703 9.4e-23 110.2 101 53.5
Glyma.01G074400 Glycine max HOM05D006948 ORTHO05D008703 9.4e-23 110.2 98 55.1
PGR042G1623 Punica granatum HOM05D006948 ORTHO05D008703 9.4e-23 110.2 82 64.6
Sabra14G0040200 Salix brachista HOM05D006948 ORTHO05D008703 9.4e-23 110.2 79 68.4
BcaC07g40567 Brassica carinata HOM05D006948 ORTHO05D008703 1.2e-22 109.8 84 59.5
BcaC07g40569 Brassica carinata HOM05D006948 ORTHO05D008703 1.2e-22 109.8 102 52.9
C08p35470 Brassica napus HOM05D006948 ORTHO05D008703 1.2e-22 109.8 84 59.5
Potri.014G054300 Populus trichocarpa HOM05D006948 ORTHO05D008703 1.2e-22 109.8 92 62.0
TPR.G39099 Trifolium pratense HOM05D006948 ORTHO05D008703 1.6e-22 109.4 97 56.7
EL10Ac1g00789 Beta vulgaris HOM05D006948 ORTHO05D008703 2.1e-22 109.0 90 60.0
Atru.chr4.2323 Acer truncatum HOM05D006948 ORTHO05D008703 2.7e-22 108.6 83 68.7
Actinidia12660 Actinidia chinensis HOM05D006948 ORTHO05D008703 4.7e-22 107.8 80 65.0
Hma1.2p1_1740F.1_g300040 Hydrangea macrophylla HOM05D006948 ORTHO05D008703 4.7e-22 107.8 76 73.7
CARHR170860 Cardamine hirsuta HOM05D006948 ORTHO05D008703 6.1e-22 107.5 80 62.5
Lalb_Chr19g0126621 Lupinus albus HOM05D006948 ORTHO05D008703 6.1e-22 107.5 91 57.1
Nitab4.5_0001818g0020 Nicotiana tabacum HOM05D006948 ORTHO05D008703 6.1e-22 107.5 91 62.6
arahy.Tifrunner.gnm1.ann1.96FU63 Arachis hypogaea HOM05D006948 ORTHO05D008703 8.0e-22 107.1 89 57.3
arahy.Tifrunner.gnm1.ann1.9NP6XU Arachis hypogaea HOM05D006948 ORTHO05D008703 8.0e-22 107.1 89 57.3
Rhsim01G0137500 Rhododendron simsii HOM05D006948 ORTHO05D008703 8.0e-22 107.1 78 69.2
Peaxi162Scf00392g00125 Petunia axillaris HOM05D006948 ORTHO05D008703 1.0e-21 106.7 94 59.6
Sp5g02740 Schrenkiella parvula HOM05D006948 ORTHO05D008703 1.0e-21 106.7 80 63.8
Haze_24986 Corylus avellana HOM05D006948 ORTHO05D008703 1.8e-21 105.9 73 74.0
CSS0003978 Camellia sinensis var. sinensis HOM05D006948 ORTHO05D008703 2.3e-21 105.5 79 68.4
PSO732G0264 Papaver somniferum HOM05D006948 ORTHO05D008703 2.3e-21 105.5 85 58.8
Prupe.2G124300 Prunus persica HOM05D006948 ORTHO05D008703 2.3e-21 105.5 99 59.6
AUR62018049 Chenopodium quinoa HOM05D006948 ORTHO05D008703 4.0e-21 104.8 72 66.7
SGA_v2.0_scaffold43G16525 Striga asiatica HOM05D006948 ORTHO05D008703 4.0e-21 104.8 102 54.9
Eucgr.E01580 Eucalyptus grandis HOM05D006948 ORTHO05D008703 1.1e-20 103.2 82 62.2
Sed0014312 Sechium edule HOM05D006948 ORTHO05D008703 2.0e-20 102.4 100 58.0
Aqoxy7G00836 Aquilegia oxysepala HOM05D006948 ORTHO05D008703 4.4e-20 101.3 87 58.6
Lsat_1_v5_gn_7_10441 Lactuca sativa HOM05D006948 ORTHO05D008703 1.3e-19 99.8 76 64.5
RcHm_v2.0_Chr1g0346581 Rosa chinensis HOM05D006948 ORTHO05D008703 1.7e-19 99.4 102 54.9
Solyc01g090500.4 Solanum lycopersicum HOM05D006948 ORTHO05D008703 2.2e-19 99.0 83 59.0
MD00G1058900 Malus domestica HOM05D006948 ORTHO05D008703 3.7e-19 98.2 98 58.2
Phvul.008G140300 Phaseolus vulgaris HOM05D006948 ORTHO05D008703 4.8e-19 97.8 82 54.9
FvH4_7g09680 Fragaria vesca HOM05D006948 ORTHO05D008703 6.3e-19 97.4 102 53.9
FAN01G0218 Fragaria x ananassa HOM05D006948 ORTHO05D008703 6.3e-19 97.4 102 53.9
FAN03G2439 Fragaria x ananassa HOM05D006948 ORTHO05D008703 6.3e-19 97.4 102 53.9
FAN06G1163 Fragaria x ananassa HOM05D006948 ORTHO05D008703 6.3e-19 97.4 102 53.9
FAN06G4415 Fragaria x ananassa HOM05D006948 ORTHO05D008703 6.3e-19 97.4 102 53.9
FAN10G3172 Fragaria x ananassa HOM05D006948 ORTHO05D008703 6.3e-19 97.4 102 53.9
FAN10G3965 Fragaria x ananassa HOM05D006948 ORTHO05D008703 6.3e-19 97.4 102 53.9
Sopen01g036290 Solanum pennellii HOM05D006948 ORTHO05D008703 8.2e-19 97.1 83 59.0
BolC8t51138H Brassica oleracea HOM05D006948 ORTHO05D008703 1.1e-18 96.7 79 59.5
A09p52730 Brassica napus HOM05D006948 ORTHO05D008703 1.4e-18 96.3 110 45.5
ClCG05G000390 Citrullus lanatus HOM05D006948 ORTHO05D008703 1.4e-18 96.3 74 63.5
MELO3C005977.2 Cucumis melo HOM05D006948 ORTHO05D008703 1.4e-18 96.3 74 62.2
ECA236G1236 Erigeron canadensis HOM05D006948 ORTHO05D008703 1.8e-18 95.9 74 63.5
HanXRQChr06g0168761 Helianthus annuus HOM05D006948 ORTHO05D008703 2.4e-18 95.5 74 64.9
BcaC07g42775 Brassica carinata HOM05D006948 ORTHO05D008703 7.0e-18 94.0 79 58.2
Dinv43640 Davidia involucrata HOM05D006948 ORTHO05D008703 7.0e-18 94.0 81 60.5
Migut.O00539 Erythranthe guttata HOM05D006948 ORTHO05D008703 7.0e-18 94.0 80 57.5
Migut.N01755 Erythranthe guttata HOM05D006948 ORTHO05D008703 9.1e-18 93.6 80 57.5
Lj1g0016170 Lotus japonicus HOM05D006948 ORTHO05D008703 9.1e-18 93.6 84 57.1
PSO675G6563 Papaver somniferum HOM05D006948 ORTHO05D008703 9.1e-18 93.6 75 61.3
THA.LOC104817199 Tarenaya hassleriana HOM05D006948 ORTHO05D008703 9.1e-18 93.6 76 65.8
QL04p032282 Quercus lobata HOM05D006948 ORTHO05D008703 3.5e-17 91.7 69 68.1
QL04p031942 Quercus lobata HOM05D006948 ORTHO05D008703 5.9e-17 90.9 78 61.5
QL04p032169 Quercus lobata HOM05D006948 ORTHO05D008703 5.9e-17 90.9 65 67.7
QL04p033225 Quercus lobata HOM05D006948 ORTHO05D008703 5.9e-17 90.9 65 67.7
AUR62013722 Chenopodium quinoa HOM05D006948 ORTHO05D008703 2.2e-16 89.0 67 61.2
Nn1g00906 Nelumbo nucifera HOM05D006948 ORTHO05D008703 2.2e-16 89.0 75 62.7
QL04p033368 Quercus lobata HOM05D006948 ORTHO05D008703 2.2e-16 89.0 76 60.5
CDE11G0572 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 1.5e-15 86.3 85 55.3
ATR0057G003 Amborella trichopoda HOM05D006948 ORTHO05D008703 4.2e-15 84.7 86 55.8
CDE02G3860 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 1.6e-14 82.8 85 54.1
Oeu035671.1 Olea europaea HOM05D006948 ORTHO05D008703 1.6e-14 82.8 86 54.7
unitig_0.g2760 Utricularia gibba HOM05D006948 ORTHO05D008703 4.7e-14 81.3 92 51.1
Nitab4.5_0002874g0090 Nicotiana tabacum HOM05D006948 ORTHO05D008703 1.8e-13 79.3 72 56.9
Psat3g154680 Pisum sativum HOM05D006948 ORTHO05D008703 2.3e-13 79.0 69 55.1
Os04g0549400 Oryza sativa ssp. japonica HOM05D006948 ORTHO05D008703 8.8e-13 77.0 95 43.2
PGSC0003DMG401026039 Solanum tuberosum HOM05D006948 ORTHO05D008703 1.2e-12 76.6 62 56.5
TAR629G0288 Trochodendron aralioides HOM05D006948 ORTHO05D000005 1.2e-12 76.6 72 58.3
Zm00001eb429840 Zea mays HOM05D006948 ORTHO05D008703 7.5e-12 73.9 92 42.4
SalBow5G2465 Salvia bowleyana HOM05D006948 ORTHO05D008703 1.7e-11 72.8 81 49.4
SalBow5G5528 Salvia bowleyana HOM05D006948 ORTHO05D008703 1.7e-11 72.8 81 49.4
Thecc.01G390600 Theobroma cacao HOM05D006948 ORTHO05D008703 1.7e-11 72.8 50 72.0
Sc23g0003950 Simmondsia chinensis HOM05D006948 ORTHO05D008703 1.4e-10 69.7 52 67.3
MD07G1101200 Malus domestica HOM05D006948 ORTHO05D008703 4.1e-10 68.2 77 53.2
Medtr7g446470 Medicago truncatula HOM05D006948 ORTHO05D008703 1.2e-09 66.6 48 68.8
SHI13603 Sapria himalayana HOM05D006948 ORTHO05D008703 1.6e-09 66.2 73 46.6
SEGI_25204 Sequoiadendron giganteum HOM05D006948 ORTHO05D008703 3.5e-09 65.1 70 55.7
SEGI_39218 Sequoiadendron giganteum HOM05D006948 ORTHO05D008703 3.5e-09 65.1 70 55.7
DCAR_025075 Daucus carota HOM05D006948 ORTHO05D008703 7.7e-09 63.9 76 46.1
HPP92_014505 Vanilla planifolia HOM05D006948 ORTHO05D008703 2.9e-08 62.0 66 47.0
ATR0767G212 Amborella trichopoda HOM05D006948 ORTHO05D008703 1.5e-07 59.7 65 53.8


User provided reference genes

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