Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 8.3e-77 290.4 160 100.0
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 3.9e-50 201.8 155 71.0
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 2.8e-48 195.7 158 73.4
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 1.6e-43 179.9 157 66.9
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 7.8e-43 177.6 155 57.4
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 8.7e-42 174.1 138 69.6
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 9.6e-41 170.6 160 56.9
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 9.6e-41 170.6 154 64.9
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 9.6e-41 170.6 159 59.7
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 2.1e-40 169.5 138 68.8
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 4.7e-40 168.3 138 69.6
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 4.0e-39 165.2 140 67.1
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 6.9e-39 164.5 140 65.7
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 9.0e-39 164.1 141 61.7
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 9.0e-39 164.1 163 51.5
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 4.4e-38 161.8 138 66.7
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 5.8e-38 161.4 156 61.5
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 5.8e-38 161.4 155 54.2
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 5.8e-38 161.4 160 59.4
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 9.9e-38 160.6 148 63.5
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 1.3e-37 160.2 155 53.5
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 2.2e-37 159.5 155 53.5
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 3.8e-37 158.7 164 51.8
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 6.4e-37 157.9 154 62.3
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 1.9e-36 156.4 150 54.7
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 5.4e-36 154.8 142 63.4
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 1.6e-35 153.3 130 67.7
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.1e-35 152.9 141 63.1
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 4.6e-35 151.8 159 64.8
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 7.8e-35 151.0 140 55.7
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 5.1e-34 148.3 130 63.1
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 1.1e-33 147.1 129 63.6
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 2.5e-33 146.0 164 53.0
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 3.3e-33 145.6 167 51.5
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 4.3e-33 145.2 125 64.0
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 9.6e-33 144.1 129 54.3
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 1.6e-32 143.3 135 59.3
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 3.6e-32 142.1 147 57.8
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 6.2e-32 141.4 159 48.4
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 1.4e-31 140.2 130 53.1
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 2.4e-31 139.4 130 63.8
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 3.1e-31 139.0 129 55.8
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 5.3e-31 138.3 156 53.2
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 6.9e-31 137.9 156 46.8
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 1.2e-30 137.1 132 52.3
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 4.5e-30 135.2 129 51.9
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 5.8e-30 134.8 102 62.7
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 7.6e-30 134.4 126 61.1
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 4.9e-29 131.7 141 54.6
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 4.9e-29 131.7 108 57.4
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 8.4e-29 131.0 115 66.1
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 5.4e-28 128.3 108 71.3
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 3.5e-27 125.6 158 44.9
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 1.3e-26 123.6 117 70.1
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 1.8e-26 123.2 130 46.2
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 3.0e-26 122.5 121 58.7
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 3.9e-26 122.1 164 53.7
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 6.7e-26 121.3 124 50.0
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 1.1e-25 120.6 95 71.6
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 2.5e-25 119.4 163 54.6
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 2.1e-24 116.3 199 37.7
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 4.8e-24 115.2 121 56.2
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 5.3e-23 111.7 113 65.5
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 4.5e-22 108.6 186 39.2
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.3e-21 107.1 88 60.2
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 6.4e-21 104.8 98 55.1
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 1.9e-20 103.2 70 65.7
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 7.1e-20 101.3 133 51.9
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 9.3e-20 100.9 114 51.8
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 1.2e-19 100.5 107 59.8
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 1.2e-19 100.5 110 59.1
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 1.6e-19 100.1 99 60.6
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 6.0e-19 98.2 110 59.1
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 7.9e-19 97.8 107 60.7
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 1.0e-18 97.4 67 67.2
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 1.8e-18 96.7 96 65.6
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 3.9e-18 95.5 107 60.7
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 3.3e-17 92.4 110 57.3
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 1.3e-16 90.5 107 57.0
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 1.6e-16 90.1 84 66.7
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 3.7e-16 89.0 107 56.1
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 6.2e-16 88.2 111 44.1
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 8.2e-16 87.8 107 58.9
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 1.8e-15 86.7 96 50.0
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 3.1e-15 85.9 95 44.2
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 6.9e-15 84.7 90 60.0
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 4.9e-13 78.6 90 56.7
MELO3C022466.2 Cucumis melo HOM05D007737 ORTHO05D009754 2.5e-12 76.3 144 37.5
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 2.7e-11 72.8 127 47.2
vmacro13551 Vaccinium macrocarpon HOM05D007737 ORTHO05D009754 3.9e-10 68.9 182 29.1
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 7.4e-09 64.7 50 58.0


User provided reference genes

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