Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G018400 Carya illinoinensis HOM05D005841 ORTHO05D007132 1.4e-18 95.1 45 100.0
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 3.8e-11 70.5 41 87.8
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 5.5e-10 66.6 41 82.9
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 2.3e-08 61.2 41 78.0
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 5.1e-08 60.1 41 75.6
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 5.1e-08 60.1 41 75.6
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 5.1e-08 60.1 41 70.7
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 6.7e-08 59.7 41 75.6
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 1.1e-07 58.9 41 73.2
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 1.1e-07 58.9 41 73.2
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 1.1e-07 58.9 41 73.2
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 1.1e-07 58.9 41 70.7
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 5.7e-07 56.6 41 63.4
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 7.4e-07 56.2 40 72.5
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 1.3e-06 55.5 41 70.7
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 1.3e-06 55.5 41 70.7
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 1.6e-06 55.1 41 65.9
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 1.6e-06 55.1 41 68.3
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 2.2e-06 54.7 41 61.0
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 2.2e-06 54.7 41 68.3
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 2.8e-06 54.3 41 68.3
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 4.8e-06 53.5 41 65.9
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 4.8e-06 53.5 41 63.4
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 4.8e-06 53.5 41 68.3
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 6.3e-06 53.1 41 63.4
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 6.3e-06 53.1 41 63.4
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 6.3e-06 53.1 41 65.9
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 6.3e-06 53.1 44 61.4
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 6.3e-06 53.1 41 63.4
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 8.2e-06 52.8 41 61.0


User provided reference genes

Program Settings