Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 3.1e-69 265.0 133 100.0
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 8.7e-64 246.9 131 91.6
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 1.8e-61 239.2 131 90.1
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 9.0e-61 236.9 131 88.5
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 7.7e-60 233.8 131 86.3
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 1.3e-59 233.0 131 85.5
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 1.3e-59 233.0 131 85.5
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 1.3e-59 233.0 131 84.7
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 5.0e-59 231.1 131 87.8
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 8.5e-59 230.3 131 84.0
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 1.1e-58 229.9 131 84.7
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.5e-58 228.8 131 83.2
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 7.2e-58 227.3 131 81.7
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 9.4e-58 226.9 131 82.4
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 9.4e-58 226.9 131 83.2
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 2.7e-57 225.3 133 82.7
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 4.6e-57 224.6 131 80.9
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 7.9e-57 223.8 139 80.6
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 2.3e-56 222.2 127 85.0
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 1.1e-55 219.9 131 80.2
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 2.0e-55 219.2 133 80.5
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 2.0e-55 219.2 131 81.7
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 2.5e-55 218.8 131 79.4
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 5.7e-55 217.6 133 79.7
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 5.7e-55 217.6 131 79.4
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 7.4e-55 217.2 131 79.4
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 9.7e-55 216.9 130 78.5
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.3e-54 216.5 131 80.9
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 1.7e-54 216.1 131 77.1
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 2.2e-54 215.7 131 79.4
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 2.2e-54 215.7 131 80.2
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 4.8e-54 214.5 131 79.4
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 6.3e-54 214.2 131 76.3
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 8.2e-54 213.8 131 77.9
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 8.2e-54 213.8 131 77.9
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 1.4e-53 213.0 131 78.6
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 1.8e-53 212.6 131 77.9
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 2.4e-53 212.2 128 78.1
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 3.1e-53 211.8 131 76.3
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 3.1e-53 211.8 123 82.1
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 3.1e-53 211.8 123 82.1
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 3.1e-53 211.8 133 75.2
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 3.1e-53 211.8 133 78.9
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 4.1e-53 211.5 131 77.9
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 4.1e-53 211.5 131 77.1
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 5.3e-53 211.1 131 76.3
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 6.9e-53 210.7 131 78.6
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 9.1e-53 210.3 134 75.4
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 1.5e-52 209.5 131 75.6
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 1.5e-52 209.5 134 75.4
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 2.0e-52 209.1 133 76.7
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 2.0e-52 209.1 131 76.3
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 2.0e-52 209.1 124 80.6
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 2.0e-52 209.1 131 75.6
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.6e-52 208.8 131 76.3
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.6e-52 208.8 131 76.3
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 4.5e-52 208.0 131 74.8
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 5.9e-52 207.6 131 76.3
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 7.7e-52 207.2 134 76.9
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 1.3e-51 206.5 129 77.5
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 1.7e-51 206.1 134 73.9
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 2.2e-51 205.7 129 76.7
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.2e-51 205.7 123 80.5
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 2.2e-51 205.7 131 75.6
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 3.8e-51 204.9 129 76.7
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 3.8e-51 204.9 130 76.9
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 6.5e-51 204.1 129 76.0
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 8.5e-51 203.8 133 71.4
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 8.5e-51 203.8 129 76.0
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 8.5e-51 203.8 129 76.0
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 8.5e-51 203.8 129 76.0
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.4e-50 203.0 131 76.3
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 1.9e-50 202.6 129 74.4
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 1.9e-50 202.6 129 76.0
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 2.5e-50 202.2 131 74.0
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 3.2e-50 201.8 129 74.4
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 5.5e-50 201.1 129 73.6
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 5.5e-50 201.1 133 71.4
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 9.4e-50 200.3 123 78.9
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 2.1e-49 199.1 129 72.9
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 2.1e-49 199.1 134 70.9
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 2.7e-49 198.7 123 76.4
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 3.6e-49 198.4 131 76.3
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 7.9e-49 197.2 129 74.4
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 7.9e-49 197.2 138 72.5
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 7.9e-49 197.2 138 72.5
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 7.9e-49 197.2 138 72.5
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 1.4e-48 196.4 138 71.0
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.4e-48 196.4 130 70.0
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 1.8e-48 196.1 127 75.6
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 1.8e-48 196.1 131 73.3
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 2.3e-48 195.7 138 71.7
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 2.3e-48 195.7 139 70.5
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 3.9e-48 194.9 131 68.7
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 5.1e-48 194.5 142 69.0
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 6.7e-48 194.1 128 73.4
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 8.8e-48 193.7 133 70.7
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 1.5e-47 193.0 127 74.8
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 2.0e-47 192.6 127 74.8
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 3.3e-47 191.8 133 69.9
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 5.7e-47 191.0 131 71.8
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 9.7e-47 190.3 132 72.0
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 3.7e-46 188.3 130 70.8
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 3.7e-46 188.3 131 71.8
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 6.3e-46 187.6 130 70.0
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 2.4e-45 185.7 129 69.8
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 5.3e-45 184.5 156 59.0
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 3.8e-43 178.3 170 54.1
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 3.6e-41 171.8 131 64.1
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 4.7e-41 171.4 131 63.4
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 8.0e-41 170.6 133 65.4
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 2.6e-39 165.6 104 77.9
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 2.4e-37 159.1 133 59.4
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 9.1e-37 157.1 93 80.6
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 2.0e-36 156.0 131 64.9
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 1.1e-34 150.2 129 58.1
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 1.1e-34 150.2 129 58.1
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 1.6e-33 146.4 127 56.7
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 8.8e-32 140.6 95 71.6
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 9.7e-31 137.1 131 51.9
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 5.9e-28 127.9 76 82.9
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 5.0e-27 124.8 75 80.0
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 2.5e-26 122.5 72 81.9
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 3.2e-26 122.1 71 81.7
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 4.2e-26 121.7 75 78.7
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 1.6e-25 119.8 71 77.5
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.0e-24 117.1 71 80.3
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 8.8e-24 114.0 63 85.7
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.2e-23 113.6 60 86.7
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 1.2e-23 113.6 60 86.7
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 6.3e-22 107.8 60 81.7
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 8.3e-22 107.5 70 71.4
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 8.3e-22 107.5 72 75.0
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 8.3e-22 107.5 61 82.0
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 5.4e-21 104.8 127 40.2
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.3e-19 100.1 72 65.3
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 2.9e-19 99.0 77 61.0
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 1.5e-18 96.7 78 65.4
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 6.1e-17 91.3 62 69.4
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 4.0e-16 88.6 77 61.0
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 2.6e-15 85.9 53 75.5
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 4.4e-15 85.1 53 79.2
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 3.5e-12 75.5 116 35.3
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 7.8e-12 74.3 74 47.3
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 1.7e-11 73.2 58 62.1
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 4.7e-09 65.1 109 29.4
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 5.2e-08 61.6 115 34.8
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 5.8e-07 58.2 74 35.1


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