Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G014900 Carya illinoinensis HOM05D009082 ORTHO05D011191 3.2e-22 107.8 68 100.0
Potri.001G028900 Populus trichocarpa HOM05D009082 ORTHO05D011191 4.2e-14 80.9 68 75.0
Medtr1g037690 Medicago truncatula HOM05D009082 ORTHO05D011191 1.2e-13 79.3 66 77.3
Medtr3g014180 Medicago truncatula HOM05D009082 ORTHO05D011191 1.0e-12 76.3 66 75.8
RcHm_v2.0_Chr1g0325751 Rosa chinensis HOM05D009082 ORTHO05D011191 1.5e-11 72.4 57 73.7
MELO3C012479.2 Cucumis melo HOM05D009082 ORTHO05D011191 5.7e-11 70.5 65 75.4
Ca_12967_v3 Cicer arietinum L. HOM05D009082 ORTHO05D011191 7.5e-11 70.1 68 70.6
ClCG05G026890 Citrullus lanatus HOM05D009082 ORTHO05D011191 9.8e-11 69.7 57 75.4
Lalb_Chr04g0264141 Lupinus albus HOM05D009082 ORTHO05D011191 9.8e-11 69.7 66 63.6
Sed0002664 Sechium edule HOM05D009082 ORTHO05D011191 9.8e-11 69.7 57 71.9
Sabra03G0145600 Salix brachista HOM05D009082 ORTHO05D011191 8.3e-10 66.6 63 69.8
TPR.G1468 Trifolium pratense HOM05D009082 ORTHO05D011191 1.1e-09 66.2 66 66.7
Lj3g0022654 Lotus japonicus HOM05D009082 ORTHO05D011191 1.8e-09 65.5 66 69.7
Potri.003G195000 Populus trichocarpa HOM05D009082 ORTHO05D011191 2.4e-09 65.1 68 66.2
Prupe.2G039300 Prunus persica HOM05D009082 ORTHO05D011191 9.1e-09 63.2 65 67.7
FAN10G1423 Fragaria x ananassa HOM05D009082 ORTHO05D011191 4.5e-08 60.8 55 72.7
Sabra01G0021000 Salix brachista HOM05D009082 ORTHO05D011191 1.0e-07 59.7 62 64.5
Gohir.A10G186700 Gossypium hirsutum HOM05D009082 ORTHO05D011191 2.9e-07 58.2 57 66.7
Gohir.D10G193600 Gossypium hirsutum HOM05D009082 ORTHO05D011191 2.9e-07 58.2 57 66.7
Gorai.011G216700 Gossypium raimondii HOM05D009082 ORTHO05D011191 2.9e-07 58.2 57 66.7
Glyma.11G156100 Glycine max HOM05D009082 ORTHO05D011191 8.6e-07 56.6 66 65.2
Glyma.13G195500 Glycine max HOM05D009082 ORTHO05D011191 8.6e-07 56.6 58 60.3
AUR62026889 Chenopodium quinoa HOM05D037138 ORTHO05D011191 2.5e-06 55.1 63 60.3
EL10Ac2g02779 Beta vulgaris HOM05D037138 ORTHO05D011191 3.3e-06 54.7 68 58.8
Ah.10g030290 Amaranthus hybridus HOM05D037138 ORTHO05D011191 5.5e-06 53.9 56 64.3
Glyma.04G135200 Glycine max HOM05D009082 ORTHO05D011191 9.5e-06 53.1 66 62.1


User provided reference genes

Program Settings