Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 1.9e-245 852.0 436 100.0
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 8.9e-198 693.7 454 79.5
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 1.7e-177 626.3 448 72.8
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 1.3e-172 610.1 436 70.9
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 2.4e-171 605.9 437 70.5
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 3.2e-171 605.5 426 72.1
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 4.1e-171 605.1 435 73.8
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 1.3e-169 600.1 428 70.8
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 1.7e-169 599.7 426 71.1
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.7e-169 599.7 428 70.8
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.1e-168 597.0 428 70.6
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.5e-168 595.9 428 70.3
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 7.3e-168 594.3 427 71.7
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 8.1e-167 590.9 420 75.7
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 8.1e-167 590.9 442 71.5
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 1.1e-166 590.5 436 71.1
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 8.9e-166 587.4 439 69.2
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 5.8e-165 584.7 439 69.2
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 1.9e-163 579.7 436 69.5
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 2.4e-163 579.3 402 72.9
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 4.6e-162 575.1 439 68.1
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 3.9e-161 572.0 438 68.5
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 1.1e-160 570.5 413 69.7
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 1.9e-160 569.7 394 72.1
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 4.3e-160 568.5 426 68.3
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 4.3e-160 568.5 437 68.0
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 5.6e-160 568.2 393 73.3
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 7.3e-160 567.8 375 74.7
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 1.1e-158 563.9 432 67.6
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 1.8e-158 563.1 433 67.0
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 3.1e-158 562.4 430 68.8
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 3.1e-158 562.4 440 65.7
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 5.3e-158 561.6 396 71.7
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 6.9e-158 561.2 392 71.9
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 6.9e-158 561.2 390 72.1
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 4.4e-157 558.5 441 67.8
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 4.4e-157 558.5 443 66.1
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 2.9e-156 555.8 372 74.2
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 6.4e-156 554.7 420 68.1
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 1.9e-155 553.1 382 72.5
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 4.6e-154 548.5 431 67.3
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 1.1e-150 537.3 422 65.4
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 1.4e-150 537.0 391 70.3
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 2.0e-149 533.1 426 65.7
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 9.9e-149 530.8 384 68.2
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 1.7e-148 530.0 429 64.1
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 5.4e-147 525.0 393 69.0
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 5.4e-147 525.0 464 62.3
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 5.4e-147 525.0 438 61.4
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 5.4e-147 525.0 387 67.2
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.8e-143 512.7 418 63.9
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.8e-143 512.7 419 63.0
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 4.8e-143 511.9 430 62.8
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 1.4e-142 510.4 397 67.0
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 1.8e-142 510.0 427 63.5
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 5.3e-142 508.4 386 65.3
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 1.2e-141 507.3 391 66.0
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.2e-141 507.3 387 68.7
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 1.5e-141 506.9 396 65.7
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 3.4e-141 505.8 427 62.5
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.3e-140 503.8 387 69.0
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 6.4e-140 501.5 388 66.8
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 1.4e-139 500.4 384 67.7
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 3.9e-137 492.3 432 61.6
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 2.6e-133 479.6 383 66.8
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 3.8e-132 475.7 424 60.8
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.9e-131 473.4 432 57.6
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 3.2e-131 472.6 419 62.1
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 6.1e-130 468.4 459 56.9
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 8.7e-129 464.5 353 66.9
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 9.7e-128 461.1 395 62.0
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 1.3e-124 450.7 373 60.3
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 1.6e-122 443.7 435 57.9
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 3.3e-120 436.0 385 59.5
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 1.3e-119 434.1 402 57.7
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 7.9e-114 414.8 308 71.8
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 7.0e-110 401.7 261 76.6
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 7.7e-109 398.3 287 69.0
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 2.9e-108 396.4 309 63.8
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 2.0e-101 373.6 391 51.7
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 6.1e-90 335.5 258 67.4
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 3.9e-76 289.7 275 58.5
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 1.7e-68 264.2 412 39.3
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 1.6e-66 257.7 376 40.7
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 3.4e-64 250.0 411 37.0
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 1.0e-60 238.4 211 59.2
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 2.2e-55 220.7 168 68.5
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 4.9e-55 219.5 214 55.6
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 4.0e-49 199.9 161 64.0
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 1.5e-40 171.4 125 68.0
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 4.6e-37 159.8 110 70.9
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 6.9e-17 92.8 78 55.1
MCO02G191 Micromonas commoda HOM05D007414 ORTHO05D009482 2.6e-16 90.9 350 26.3
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 4.6e-13 80.1 308 26.3
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 5.1e-12 76.6 81 50.6
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 9.7e-11 72.4 70 52.9
Sabra03G0146300 Salix brachista HOM05D007414 ORTHO05D009482 3.7e-10 70.5 46 69.6
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 5.3e-09 66.6 62 56.5
TPR.G34603 Trifolium pratense HOM05D007414 ORTHO05D009482 6.9e-09 66.2 55 60.0
Oeu014631.1 Olea europaea HOM05D007414 ORTHO05D009482 3.4e-08 63.9 53 64.2
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 1.7e-07 61.6 366 24.0
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 5.0e-07 60.1 392 22.7
PRCOL_00006348 Prasinoderma coloniale HOM05D007414 ORTHO05D333730 1.9e-06 58.2 199 31.2
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 5.5e-06 56.6 367 21.8
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 7.2e-06 56.2 274 25.2
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 9.4e-06 55.8 410 22.7


User provided reference genes

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