Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 2.6e-63 245.4 138 100.0
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 5.2e-35 151.4 136 61.8
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 1.3e-33 146.7 135 61.5
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 6.3e-33 144.4 144 63.2
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 2.7e-31 139.0 134 61.9
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 8.6e-30 134.0 111 71.2
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 1.1e-29 133.7 135 63.7
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 3.3e-29 132.1 137 58.4
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 5.5e-29 131.3 139 63.3
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 5.5e-29 131.3 125 60.8
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.2e-28 130.2 139 62.6
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.6e-28 129.8 129 58.9
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 2.8e-28 129.0 137 56.9
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 3.6e-28 128.6 136 56.6
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 4.7e-28 128.3 130 62.3
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 6.1e-28 127.9 134 62.7
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.0e-27 127.1 116 67.2
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 1.0e-27 127.1 129 58.9
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 2.3e-27 125.9 128 59.4
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 2.3e-27 125.9 140 54.3
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 6.8e-27 124.4 102 69.6
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 6.8e-27 124.4 124 60.5
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 8.9e-27 124.0 139 58.3
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 9.8e-26 120.6 138 58.0
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 9.8e-26 120.6 141 56.0
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 1.7e-25 119.8 125 53.6
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 2.9e-25 119.0 106 63.2
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 4.9e-25 118.2 158 50.0
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 6.3e-25 117.9 145 55.2
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 8.3e-25 117.5 137 51.8
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 1.4e-24 116.7 104 62.5
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 2.4e-24 115.9 153 49.7
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 7.0e-24 114.4 162 50.0
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 7.0e-24 114.4 134 62.7
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 1.2e-23 113.6 151 49.7
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 1.6e-23 113.2 141 50.4
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 2.0e-23 112.8 143 49.7
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 3.5e-23 112.1 161 49.1
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 4.6e-23 111.7 144 50.0
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 7.8e-23 110.9 119 60.5
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 7.8e-23 110.9 157 50.3
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.0e-22 110.5 135 55.6
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 1.0e-22 110.5 140 50.7
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.3e-22 110.2 161 48.4
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 1.7e-22 109.8 147 49.7
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 2.9e-22 109.0 134 53.0
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 5.0e-22 108.2 97 66.0
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 6.6e-22 107.8 117 59.0
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.5e-21 106.7 115 54.8
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 1.5e-21 106.7 115 54.8
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.5e-21 105.9 115 56.5
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 3.3e-21 105.5 133 52.6
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 4.3e-21 105.1 118 55.1
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 5.6e-21 104.8 97 63.9
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 5.6e-21 104.8 104 63.5
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 7.3e-21 104.4 134 50.7
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 1.2e-20 103.6 111 54.1
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 3.6e-20 102.1 106 58.5
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.4e-19 100.1 127 52.8
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 1.4e-19 100.1 111 55.0
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.4e-19 100.1 132 50.0
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 2.3e-19 99.4 134 47.0
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 4.0e-19 98.6 112 59.8
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 4.0e-19 98.6 141 45.4
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 8.9e-19 97.4 100 58.0
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 2.6e-18 95.9 102 61.8
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 4.4e-18 95.1 131 48.1
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 4.4e-18 95.1 120 51.7
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.3e-17 93.6 103 60.2
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 1.7e-17 93.2 114 51.8
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 2.2e-17 92.8 111 59.5
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 2.9e-17 92.4 124 48.4
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 8.3e-17 90.9 117 49.6
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 1.1e-16 90.5 111 57.7
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.1e-16 90.5 127 49.6
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.9e-16 89.7 102 59.8
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 4.1e-16 88.6 102 53.9
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 1.2e-15 87.0 132 53.8
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 1.2e-15 87.0 102 57.8
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 3.5e-15 85.5 130 41.5
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 1.3e-14 83.6 102 55.9
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 3.9e-14 82.0 103 58.3
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 4.3e-13 78.6 104 50.0
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 5.6e-13 78.2 110 49.1
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 1.6e-12 76.6 182 38.5
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 1.6e-12 76.6 182 38.5
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 1.1e-11 73.9 128 39.8
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 1.1e-11 73.9 99 52.5
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 2.3e-11 72.8 104 51.0
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 4.0e-11 72.0 107 45.8
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 5.2e-11 71.6 129 50.4
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.8e-10 68.2 107 47.7
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.3e-09 67.0 108 44.4
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 1.7e-09 66.6 80 52.5
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 8.3e-09 64.3 136 36.0
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 3.2e-08 62.4 124 37.1
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.1e-08 62.0 105 40.0
BolC8t52551H Brassica oleracea HOM05D001466 ORTHO05D001452 1.6e-07 60.1 106 43.4
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.6e-07 60.1 115 40.9
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 4.6e-07 58.5 133 35.3


User provided reference genes

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