Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G000700 Carya illinoinensis HOM05D008109 ORTHO05D009894 1.8e-73 279.3 147 100.0
Haze_03277 Corylus avellana HOM05D008109 ORTHO05D009894 2.9e-36 155.6 148 67.6
Cfa010699 Carpinus fangiana HOM05D008109 ORTHO05D009894 3.2e-35 152.1 148 65.5
QL04p002011 Quercus lobata HOM05D008109 ORTHO05D009894 3.1e-30 135.6 151 62.9
Gohir.D06G219700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 2.4e-22 109.4 156 50.0
Gorai.010G246800 Gossypium raimondii HOM05D008109 ORTHO05D009894 5.4e-22 108.2 156 50.0
Nn7g35907 Nelumbo nucifera HOM05D008109 ORTHO05D009894 4.5e-21 105.1 172 45.3
Gohir.A06G202200 Gossypium hirsutum HOM05D008109 ORTHO05D009894 5.9e-21 104.8 156 48.7
Cc02_g26790 Coffea canephora HOM05D008109 ORTHO05D009894 1.3e-20 103.6 146 50.0
Dinv43946 Davidia involucrata HOM05D008109 ORTHO05D009894 2.9e-20 102.4 150 47.3
vmacro22469 Vaccinium macrocarpon HOM05D008109 ORTHO05D009894 1.5e-19 100.1 140 49.3
TWI09G0246 Tripterygium wilfordii HOM05D008109 ORTHO05D009894 3.3e-19 99.0 145 52.4
Hma1.2p1_0541F.1_g174770 Hydrangea macrophylla HOM05D008109 ORTHO05D009894 5.5e-19 98.2 156 47.4
Cc02_g26780 Coffea canephora HOM05D008109 ORTHO05D009894 6.1e-18 94.7 146 47.9
Nn2g15812 Nelumbo nucifera HOM05D008109 ORTHO05D009894 6.1e-18 94.7 182 42.3
Duzib192G0509 Durio zibethinus HOM05D008109 ORTHO05D009894 1.8e-17 93.2 162 48.1
Duzib235G0400 Durio zibethinus HOM05D008109 ORTHO05D009894 3.0e-17 92.4 160 45.0
Potri.001G232200 Populus trichocarpa HOM05D008109 ORTHO05D009894 3.0e-17 92.4 174 44.3
Medtr2g062280 Medicago truncatula HOM05D008109 ORTHO05D009894 8.9e-17 90.9 157 41.4
Thecc.06G002700 Theobroma cacao HOM05D008109 ORTHO05D009894 8.9e-17 90.9 161 46.6
Sabra16G0138900 Salix brachista HOM05D008109 ORTHO05D009894 2.2e-15 86.3 184 41.3
Phvul.005G042700 Phaseolus vulgaris HOM05D008109 ORTHO05D009894 8.3e-15 84.3 159 40.9
TPR.G10815 Trifolium pratense HOM05D008109 ORTHO05D009894 8.3e-15 84.3 146 41.8
Ciclev10032944m.g Citrus clementina HOM05D008109 ORTHO05D009894 1.1e-14 84.0 148 42.6
Gohir.A05G110700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 2.4e-14 82.8 151 45.0
MSTRG.28106 Avicennia marina HOM05D008109 ORTHO05D009894 3.1e-14 82.4 131 45.0
VMungo1080G1374 Vigna mungo HOM05D008109 ORTHO05D009894 5.4e-14 81.6 159 40.3
ClCG09G003640 Citrullus lanatus HOM05D008109 ORTHO05D009894 1.2e-13 80.5 158 41.8
Lalb_Chr25g0283751 Lupinus albus HOM05D008109 ORTHO05D009894 1.6e-13 80.1 158 40.5
PGSC0003DMG400015658 Solanum tuberosum HOM05D008109 ORTHO05D009894 1.6e-13 80.1 130 47.7
TAR623G1474 Trochodendron aralioides HOM05D008109 ORTHO05D009894 2.0e-13 79.7 97 53.6
Nitab4.5_0004375g0040 Nicotiana tabacum HOM05D008109 ORTHO05D009894 4.5e-13 78.6 130 47.7
Lj3g0014063 Lotus japonicus HOM05D008109 ORTHO05D009894 5.9e-13 78.2 169 40.8
CsaV3_7G031540 Cucumis sativus L. HOM05D008109 ORTHO05D009894 7.8e-13 77.8 157 40.1
Potri.009G024700 Populus trichocarpa HOM05D008109 ORTHO05D009894 1.3e-12 77.0 186 38.7
CAN.G103.18 Capsicum annuum HOM05D008109 ORTHO05D009894 1.7e-12 76.6 122 48.4
Peaxi162Scf01343g00014 Petunia axillaris HOM05D008109 ORTHO05D009894 1.7e-12 76.6 128 46.9
Rhsim07G0049100 Rhododendron simsii HOM05D008109 ORTHO05D009894 1.7e-12 76.6 111 51.4
Aqoxy1G00435 Aquilegia oxysepala HOM05D008109 ORTHO05D009894 2.3e-12 76.3 166 35.5
Nitab4.5_0000266g0110 Nicotiana tabacum HOM05D008109 ORTHO05D009894 2.9e-12 75.9 129 47.3
Gohir.D05G111100 Gossypium hirsutum HOM05D008109 ORTHO05D009894 5.0e-12 75.1 151 43.0
MELO3C023500.2 Cucumis melo HOM05D008109 ORTHO05D009894 6.6e-12 74.7 148 37.2
Prupe.2G001600 Prunus persica HOM05D008109 ORTHO05D009894 8.6e-12 74.3 165 39.4
Atru.chr11.2715 Acer truncatum HOM05D008109 ORTHO05D009894 1.1e-11 73.9 174 37.9
Gorai.009G115400 Gossypium raimondii HOM05D008109 ORTHO05D009894 2.5e-11 72.8 151 42.4
Lsat_1_v5_gn_1_89920 Lactuca sativa HOM05D008109 ORTHO05D009894 4.3e-11 72.0 145 39.3
Sed0022406 Sechium edule HOM05D008109 ORTHO05D009894 4.3e-11 72.0 153 34.6
Sed0011083 Sechium edule HOM05D008109 ORTHO05D009894 5.6e-11 71.6 163 38.7
AUR62012433 Chenopodium quinoa HOM05D008109 ORTHO05D009894 7.3e-11 71.2 145 40.0
AUR62031557 Chenopodium quinoa HOM05D008109 ORTHO05D009894 2.1e-10 69.7 145 39.3
Eucgr.I02808 Eucalyptus grandis HOM05D008109 ORTHO05D009894 2.1e-10 69.7 162 39.5
Solyc06g051220.1 Solanum lycopersicum HOM05D008109 ORTHO05D009894 2.8e-10 69.3 140 44.3
DCAR_029584 Daucus carota HOM05D008109 ORTHO05D009894 6.1e-10 68.2 153 35.9
Glyma.08G158700 Glycine max HOM05D008109 ORTHO05D009894 6.1e-10 68.2 194 35.6
Manes.10G153100 Manihot esculenta HOM05D011216 ORTHO05D009894 1.4e-09 67.0 162 35.8
Ah.16g104750 Amaranthus hybridus HOM05D008109 ORTHO05D009894 3.1e-09 65.9 128 37.5
Dinv43505 Davidia involucrata HOM05D008109 ORTHO05D009894 3.1e-09 65.9 125 47.2
Oeu032778.1 Olea europaea HOM05D008109 ORTHO05D009894 3.1e-09 65.9 139 37.4
PGR031G1804 Punica granatum HOM05D008109 ORTHO05D009894 5.8e-08 61.6 151 41.1
THA.LOC104815879 Tarenaya hassleriana HOM05D011216 ORTHO05D009894 9.8e-08 60.8 167 32.3
Glyma.15G267600 Glycine max HOM05D008109 ORTHO05D009894 1.7e-07 60.1 183 36.6
MBI01_g20511_MAGBIO Magnolia biondii HOM05D011216 ORTHO05D009894 1.1e-06 57.4 148 38.5
Thhalv10017383m.g Eutrema salsugineum HOM05D011216 ORTHO05D009894 1.4e-06 57.0 135 37.0
Oeu024942.1 Olea europaea HOM05D008109 ORTHO05D009894 1.9e-06 56.6 146 35.6
Sp4g14290 Schrenkiella parvula HOM05D011216 ORTHO05D009894 2.4e-06 56.2 159 34.6
C04p17830 Brassica napus HOM05D011216 ORTHO05D009894 3.2e-06 55.8 136 36.0
BolC4t23331H Brassica oleracea HOM05D011216 ORTHO05D009894 3.2e-06 55.8 136 36.0
AT2G31930 Arabidopsis thaliana HOM05D011216 ORTHO05D009894 7.0e-06 54.7 145 33.8


User provided reference genes

Program Settings