Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G137700 Carya illinoinensis HOM05D005849 ORTHO05D004704 1.6e-183 646.0 339 100.0
CiPaw.11G203200 Carya illinoinensis HOM05D005849 ORTHO05D004704 4.9e-71 272.3 243 67.9
QL08p004345 Quercus lobata HOM05D005849 ORTHO05D004704 1.3e-66 257.7 237 67.1
QL11p054311 Quercus lobata HOM05D005849 ORTHO05D004704 1.6e-66 257.3 232 68.1
Cfa020199 Carpinus fangiana HOM05D005849 ORTHO05D004704 4.7e-53 212.6 255 55.7
Haze_09816 Corylus avellana HOM05D005849 ORTHO05D004704 1.0e-47 194.9 183 66.1
Potri.001G367100 Populus trichocarpa HOM05D005849 ORTHO05D004704 2.2e-34 150.6 242 46.3
Manes.03G140700 Manihot esculenta HOM05D005849 ORTHO05D004704 2.2e-31 140.6 242 44.2
Manes.03G140566 Manihot esculenta HOM05D005849 ORTHO05D004704 2.9e-31 140.2 242 44.2
Duzib213G0789 Durio zibethinus HOM05D005849 ORTHO05D004704 1.9e-30 137.5 250 43.2
Manes.15G060700 Manihot esculenta HOM05D005849 ORTHO05D004704 5.5e-30 136.0 244 43.0
Sabra16G0240400 Salix brachista HOM05D005849 ORTHO05D004704 2.3e-28 130.6 246 42.3
Ciclev10009298m.g Citrus clementina HOM05D005849 ORTHO05D004704 1.4e-25 121.3 251 36.7
Dinv10326 Davidia involucrata HOM05D005849 ORTHO05D004704 7.0e-25 119.0 253 41.1
VMungo0540G1302 Vigna mungo HOM05D005849 ORTHO05D004704 1.1e-22 111.7 284 37.7
Thecc.07G014700 Theobroma cacao HOM05D005849 ORTHO05D004704 2.5e-22 110.5 228 38.6
Gohir.A01G091100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 3.3e-22 110.2 246 38.6
Gorai.002G099600 Gossypium raimondii HOM05D005849 ORTHO05D004704 4.2e-22 109.8 247 38.1
Glyma.18G077800 Glycine max HOM05D014115 ORTHO05D004704 5.5e-22 109.4 281 36.3
Phvul.006G056700 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 3.6e-21 106.7 262 36.6
TWI38G0138 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 1.0e-20 105.1 221 39.8
Nn1g03187 Nelumbo nucifera HOM05D005849 ORTHO05D004704 1.4e-20 104.8 240 37.9
Glyma.08G329000 Glycine max HOM05D005849 ORTHO05D004704 3.0e-20 103.6 281 36.3
Prupe.4G242400 Prunus persica HOM05D005849 ORTHO05D004704 9.8e-19 98.6 189 44.4
Cpa.g.sc12.153 Carica papaya HOM05D005849 ORTHO05D004704 1.3e-18 98.2 252 38.9
COL.COLO4_09821 Corchorus olitorius HOM05D005849 ORTHO05D004704 2.4e-17 94.0 230 37.8
COL.COLO4_19617 Corchorus olitorius HOM05D005849 ORTHO05D004704 2.4e-17 94.0 256 34.4
CANSAT11G2057 Cannabis sativa HOM05D005849 ORTHO05D004704 4.1e-17 93.2 256 37.1
Glyma.02G300100 Glycine max HOM05D014115 ORTHO05D004704 5.9e-16 89.4 263 34.6
Lj6g0007370 Lotus japonicus HOM05D005849 ORTHO05D004704 7.8e-16 89.0 283 31.4
Dinv26604 Davidia involucrata HOM05D005849 ORTHO05D004704 1.3e-15 88.2 236 36.0
Gohir.D01G076400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.7e-15 87.8 188 39.9
Sabra14G0127500 Salix brachista HOM05D005849 ORTHO05D004704 1.5e-14 84.7 217 35.5
TAR629G2787 Trochodendron aralioides HOM05D005849 ORTHO05D004704 3.3e-14 83.6 142 43.0
Aqoxy4G02338 Aquilegia oxysepala HOM05D005849 ORTHO05D004704 4.3e-14 83.2 234 32.9
Duzib138G1177 Durio zibethinus HOM05D005849 ORTHO05D004704 4.3e-14 83.2 242 31.0
TAR629G2911 Trochodendron aralioides HOM05D005849 ORTHO05D004704 7.3e-14 82.4 241 36.1
Nn1g07503 Nelumbo nucifera HOM05D005849 ORTHO05D004704 9.5e-14 82.0 152 40.8
QL04p068477 Quercus lobata HOM05D005849 ORTHO05D004704 1.2e-13 81.6 234 35.0
Prupe.3G197400 Prunus persica HOM05D005849 ORTHO05D004704 2.8e-13 80.5 250 32.8
Duzib133G0645 Durio zibethinus HOM05D005849 ORTHO05D004704 3.6e-13 80.1 225 35.1
Potri.014G167700 Populus trichocarpa HOM05D005849 ORTHO05D004704 6.1e-13 79.3 248 33.1
Glyma.14G013800 Glycine max HOM05D014115 ORTHO05D004704 8.0e-13 79.0 266 30.1
PSO541G2883 Papaver somniferum HOM05D005849 ORTHO05D004704 8.0e-13 79.0 277 31.4
Manes.13G061900 Manihot esculenta HOM05D005849 ORTHO05D004704 1.0e-12 78.6 240 35.4
Thecc.01G196200 Theobroma cacao HOM05D005849 ORTHO05D004704 1.0e-12 78.6 259 31.3
Psat5g169040 Pisum sativum HOM05D014115 ORTHO05D004704 1.5e-11 74.7 223 30.5
Haze_12628 Corylus avellana HOM05D005849 ORTHO05D004704 3.4e-11 73.6 241 29.9
Lj8P136T22 Lonicera japonica HOM05D005849 ORTHO05D004704 3.4e-11 73.6 232 36.2
PSO675G3647 Papaver somniferum HOM05D005849 ORTHO05D004704 3.4e-11 73.6 277 31.0
MBI16_g22138_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 7.5e-11 72.4 205 35.1
Gorai.001G222200 Gossypium raimondii HOM05D005849 ORTHO05D004704 9.8e-11 72.0 228 32.0
Gohir.D07G198400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.3e-10 71.6 228 32.0
VMungo0647G1046 Vigna mungo HOM05D014115 ORTHO05D004704 1.3e-10 71.6 244 30.3
MD09G1126800 Malus domestica HOM05D005849 ORTHO05D004704 1.7e-10 71.2 235 32.3
Gohir.D07G171100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 2.9e-10 70.5 216 33.3
Lalb_Chr15g0082031 Lupinus albus HOM05D005849 ORTHO05D004704 2.9e-10 70.5 114 50.9
Gorai.001G191400 Gossypium raimondii HOM05D005849 ORTHO05D004704 3.7e-10 70.1 216 33.3
Phvul.008G278800 Phaseolus vulgaris HOM05D014115 ORTHO05D004704 3.7e-10 70.1 245 30.6
Actinidia35203 Actinidia chinensis HOM05D005849 ORTHO05D004704 4.9e-10 69.7 241 32.4
Gohir.A07G169800 Gossypium hirsutum HOM05D005849 ORTHO05D004704 4.9e-10 69.7 214 31.3
Cfa014225 Carpinus fangiana HOM05D005849 ORTHO05D004704 6.4e-10 69.3 227 31.3
TPR.G35467 Trifolium pratense HOM05D014115 ORTHO05D004704 6.4e-10 69.3 295 28.8
Medtr3g058930 Medicago truncatula HOM05D014115 ORTHO05D004704 1.1e-09 68.6 314 28.3
Medtr5g095710 Medicago truncatula HOM05D014115 ORTHO05D004704 1.4e-09 68.2 241 32.4
Gohir.A07G192100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.9e-09 67.8 228 30.3
MD17G1117100 Malus domestica HOM05D005849 ORTHO05D004704 1.9e-09 67.8 166 38.0
Medtr5g098480 Medicago truncatula HOM05D005849 ORTHO05D004704 4.1e-09 66.6 132 39.4
TPR.G8608 Trifolium pratense HOM05D014115 ORTHO05D015996 4.1e-09 66.6 231 32.9
Cpa.g.sc136.30 Carica papaya HOM05D005849 ORTHO05D004704 1.2e-08 65.1 244 33.6
Manes.12G064702 Manihot esculenta HOM05D005849 ORTHO05D004704 1.2e-08 65.1 130 43.1
arahy.Tifrunner.gnm1.ann1.715EVP Arachis hypogaea HOM05D005849 ORTHO05D004704 2.7e-08 63.9 207 33.3
CiPaw.03G281900 Carya illinoinensis HOM05D005849 ORTHO05D004704 4.6e-08 63.2 213 32.9
TWI36G1699 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 4.6e-08 63.2 239 28.9
Solyc07g045450.1 Solanum lycopersicum HOM05D005849 ORTHO05D004704 6.0e-08 62.8 117 41.0
Sopen07g023990 Solanum pennellii HOM05D005849 ORTHO05D004704 6.0e-08 62.8 117 41.0
Dinv21298 Davidia involucrata HOM05D005849 ORTHO05D004704 1.0e-07 62.0 239 31.8
arahy.Tifrunner.gnm1.ann1.UTL0P7 Arachis hypogaea HOM05D005849 ORTHO05D004704 1.3e-07 61.6 136 40.4
Lj8P178T38 Lonicera japonica HOM05D005849 ORTHO05D004704 1.7e-07 61.2 98 45.9
MBI19_g14891_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 1.7e-07 61.2 190 33.2
Cc03_g07410 Coffea canephora HOM05D005849 ORTHO05D004704 3.0e-07 60.5 179 35.2
Actinidia18832 Actinidia chinensis HOM05D005849 ORTHO05D004704 3.9e-07 60.1 79 49.4
Glyma.13G006500 Glycine max HOM05D005849 ORTHO05D004704 3.9e-07 60.1 257 26.8
Nn1g04368 Nelumbo nucifera HOM05D005849 ORTHO05D004704 8.6e-07 58.9 112 40.2
CiPaw.04G197000 Carya illinoinensis HOM05D005849 ORTHO05D004704 1.5e-06 58.2 248 30.2
Eucgr.F03692 Eucalyptus grandis HOM05D005849 ORTHO05D004704 1.5e-06 58.2 239 29.3
FAN05G2424 Fragaria x ananassa HOM05D005849 ORTHO05D004704 1.9e-06 57.8 245 30.6
FAN09G2506 Fragaria x ananassa HOM05D005849 ORTHO05D004704 1.9e-06 57.8 245 30.2
FvH4_6g40610 Fragaria vesca HOM05D005849 ORTHO05D004704 3.3e-06 57.0 245 29.8
FAN14G3262 Fragaria x ananassa HOM05D005849 ORTHO05D004704 3.3e-06 57.0 245 29.8
RcHm_v2.0_Chr2g0155981 Rosa chinensis HOM05D005849 ORTHO05D004704 3.3e-06 57.0 245 29.4
PGR083G2364 Punica granatum HOM05D005849 ORTHO05D004704 5.6e-06 56.2 145 34.5
Peaxi162Scf00802g00130 Petunia axillaris HOM05D005849 ORTHO05D004704 7.3e-06 55.8 71 47.9
Rhsim06G0176600 Rhododendron simsii HOM05D005849 ORTHO05D004704 7.3e-06 55.8 215 32.1
LjContig00081g0015024 Lotus japonicus HOM05D005849 ORTHO05D004704 9.5e-06 55.5 241 29.9
TPR.G35904 Trifolium pratense HOM05D005849 ORTHO05D004704 9.5e-06 55.5 108 42.6


User provided reference genes

Program Settings