Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 2.5e-223 778.5 394 100.0
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 1.5e-175 619.8 390 80.5
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 1.7e-168 596.3 391 78.8
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 2.3e-152 542.7 380 74.7
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 3.6e-150 535.4 389 69.2
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 4.8e-150 535.0 387 69.5
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 6.2e-150 534.6 388 68.3
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 3.1e-149 532.3 391 68.3
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 9.0e-149 530.8 389 68.1
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 9.0e-149 530.8 393 68.2
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 2.0e-148 529.6 386 67.6
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 3.4e-148 528.9 386 68.1
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 7.6e-148 527.7 386 67.6
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.6e-145 520.0 389 66.8
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 2.7e-145 519.2 386 67.4
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 1.0e-144 517.3 391 67.3
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 1.8e-144 516.5 389 66.3
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.9e-143 513.1 390 65.4
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 7.6e-140 501.1 393 64.1
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 9.3e-138 494.2 385 65.2
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 2.1e-137 493.0 395 65.1
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 6.0e-137 491.5 392 63.5
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 7.9e-137 491.1 389 63.8
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 3.9e-136 488.8 389 63.5
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 1.5e-135 486.9 389 63.5
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 1.9e-135 486.5 393 63.9
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 3.3e-135 485.7 397 62.5
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.6e-134 483.4 389 64.0
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 4.8e-134 481.9 400 62.5
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 6.2e-134 481.5 390 62.3
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 1.5e-132 476.9 390 62.6
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 5.8e-132 474.9 390 62.8
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 4.9e-131 471.9 389 59.9
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 2.5e-130 469.5 390 61.0
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 4.2e-130 468.8 388 62.4
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 7.1e-130 468.0 394 60.4
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 9.3e-130 467.6 391 62.4
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 3.5e-129 465.7 392 61.7
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 4.6e-129 465.3 394 59.6
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 4.6e-129 465.3 389 60.4
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 6.0e-129 464.9 392 61.0
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 6.7e-128 461.5 389 61.7
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 1.9e-127 459.9 398 60.3
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 5.7e-127 458.4 363 63.9
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 2.8e-126 456.1 388 60.6
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 6.3e-126 454.9 390 60.3
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 2.4e-125 453.0 395 59.0
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 6.9e-125 451.4 388 60.6
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 9.0e-125 451.1 384 59.6
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 1.2e-124 450.7 343 65.9
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 2.0e-124 449.9 393 61.3
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 3.4e-124 449.1 392 62.2
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 4.5e-124 448.7 386 60.4
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 7.6e-124 448.0 368 62.2
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 1.3e-123 447.2 385 60.5
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 6.5e-123 444.9 386 58.3
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 8.5e-123 444.5 395 58.2
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 1.1e-122 444.1 392 58.2
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 1.4e-122 443.7 385 59.2
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 1.9e-122 443.4 388 60.1
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 1.9e-122 443.4 333 65.8
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 2.5e-122 443.0 390 58.5
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 9.3e-122 441.0 367 61.6
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 2.1e-121 439.9 397 58.7
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 7.9e-121 438.0 355 60.3
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 1.8e-120 436.8 316 68.0
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 1.5e-119 433.7 396 57.6
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 4.3e-119 432.2 387 56.8
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 5.7e-119 431.8 391 56.0
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 1.4e-117 427.2 409 54.5
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 1.8e-117 426.8 389 56.3
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 3.4e-116 422.5 385 55.1
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 5.0e-115 418.7 394 56.1
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 9.4e-114 414.5 386 58.3
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 6.1e-113 411.8 347 61.7
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 1.0e-112 411.0 396 54.8
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 5.1e-112 408.7 383 56.7
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.3e-110 404.1 320 66.9
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 6.3e-110 401.7 312 63.5
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 1.1e-109 401.0 391 54.2
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 1.3e-107 394.0 392 54.8
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 8.0e-105 384.8 349 57.9
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 9.4e-98 361.3 420 47.4
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 2.3e-96 356.7 317 58.4
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 3.3e-95 352.8 266 66.2
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 2.2e-94 350.1 297 60.9
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 3.7e-94 349.4 290 61.0
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 1.9e-90 337.0 290 56.9
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 2.3e-88 330.1 239 66.9
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 2.3e-83 313.5 290 57.2
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 1.8e-80 303.9 390 43.3
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 4.4e-79 299.3 283 53.7
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 1.1e-74 284.6 268 55.2
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 2.8e-73 280.0 377 43.0
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 1.0e-59 235.0 232 53.0
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 4.7e-57 226.1 212 54.7
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 1.3e-54 218.0 218 54.6
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 6.4e-54 215.7 200 55.0
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 1.2e-49 201.4 282 43.3
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 5.4e-45 186.0 399 33.6
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.6e-44 184.5 386 34.7
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 1.3e-38 164.9 204 42.6
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 6.0e-36 156.0 350 33.1
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 2.4e-32 144.1 99 74.7
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 1.2e-31 141.7 235 38.3
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 4.0e-24 116.7 91 62.6
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.3e-22 111.7 134 43.3
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 2.5e-13 80.9 100 42.0
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 5.1e-11 73.2 89 41.6
MELO3C029988.2 Cucumis melo HOM05D007013 ORTHO05D029173 7.4e-10 69.3 58 65.5
MELO3C025412.2 Cucumis melo HOM05D007013 ORTHO05D029173 1.6e-09 68.2 57 64.9
Rhsim06G0218700 Rhododendron simsii HOM05D007013 ORTHO05D008999 1.6e-09 68.2 67 52.2
MELO3C022571.2 Cucumis melo HOM05D016993 ORTHO05D019020 2.2e-09 67.8 58 63.8
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 8.2e-09 65.9 90 42.2
MELO3C029511.2 Cucumis melo HOM05D007013 ORTHO05D029173 2.4e-08 64.3 56 64.3
Medtr0152s0050 Medicago truncatula HOM05D007013 ORTHO05D008999 4.1e-08 63.5 70 48.6
MELO3C029866.2 Cucumis melo HOM05D007013 ORTHO05D029173 1.2e-07 62.0 57 59.6


User provided reference genes

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