Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 1.0e-285 986.1 523 100.0
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 1.7e-171 606.7 535 63.2
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 3.9e-160 568.9 568 59.9
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 9.8e-143 511.1 531 57.6
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 1.2e-111 407.9 542 48.0
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 5.6e-106 389.0 528 46.0
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 1.6e-105 387.5 531 45.6
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 1.2e-103 381.3 525 45.9
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 3.4e-103 379.8 514 47.5
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.0e-99 368.2 529 44.4
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.5e-98 363.6 531 45.0
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 3.3e-98 363.2 525 49.1
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 5.6e-98 362.5 545 44.4
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 1.2e-97 361.3 531 45.2
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.4e-96 357.8 539 45.1
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 1.4e-96 357.8 544 43.2
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 9.0e-96 355.1 527 43.5
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 1.2e-95 354.8 478 46.7
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.6e-95 353.6 461 50.5
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 7.6e-95 352.1 538 43.3
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 9.9e-95 351.7 461 50.3
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 2.2e-94 350.5 532 46.2
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 2.1e-92 344.0 527 43.6
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 6.6e-91 339.0 534 42.7
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.1e-90 338.2 531 43.7
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 4.0e-88 329.7 531 42.2
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 9.9e-87 325.1 566 39.9
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 1.3e-86 324.7 565 41.1
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 3.8e-86 323.2 421 49.2
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 3.2e-85 320.1 570 40.9
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 4.2e-85 319.7 549 42.8
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 7.1e-85 318.9 577 38.5
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 1.8e-83 314.3 527 42.3
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 2.3e-83 313.9 515 41.9
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 8.7e-83 312.0 656 35.7
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.1e-80 305.1 529 43.3
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 1.4e-80 304.7 612 37.6
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 1.2e-79 301.6 549 42.6
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 2.6e-79 300.4 580 40.0
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 2.6e-79 300.4 571 39.8
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 5.8e-79 299.3 364 48.4
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.7e-78 297.7 525 39.6
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 2.7e-76 290.4 398 44.7
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 2.3e-75 287.3 521 39.2
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 3.0e-75 287.0 523 39.8
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 1.9e-74 284.3 537 38.5
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 4.8e-73 279.6 356 48.9
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 1.1e-72 278.5 538 38.5
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 1.8e-72 277.7 528 35.8
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 2.4e-72 277.3 603 36.8
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 5.3e-72 276.2 504 37.5
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 4.5e-71 273.1 402 43.8
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 1.0e-70 271.9 398 43.0
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 1.3e-70 271.6 536 38.8
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.3e-70 271.6 433 46.2
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 4.9e-70 269.6 531 36.7
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 3.2e-69 266.9 535 38.1
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 9.3e-69 265.4 549 34.2
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 1.6e-68 264.6 530 38.3
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 2.1e-68 264.2 500 38.0
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 4.6e-68 263.1 547 36.2
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 8.7e-67 258.8 406 44.8
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 1.1e-66 258.5 417 40.8
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 1.5e-66 258.1 588 37.4
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 4.3e-66 256.5 464 39.7
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 8.2e-65 252.3 388 44.6
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 2.4e-64 250.8 530 36.6
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 4.1e-64 250.0 534 37.1
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 9.0e-64 248.8 530 37.0
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 1.2e-63 248.4 517 36.2
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 2.6e-63 247.3 415 37.6
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 3.4e-63 246.9 487 37.2
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 7.7e-63 245.7 350 44.3
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 1.3e-62 245.0 522 36.4
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 1.1e-61 241.9 403 40.7
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 3.2e-61 240.4 519 36.4
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 3.2e-61 240.4 542 37.1
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.2e-60 238.4 514 37.7
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 2.1e-60 237.7 528 36.6
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 3.6e-60 236.9 535 33.8
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 4.6e-60 236.5 591 32.1
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 6.1e-60 236.1 492 35.0
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.8e-59 234.6 620 32.6
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 3.0e-59 233.8 372 41.7
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 8.8e-59 232.3 541 35.3
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 7.4e-58 229.2 538 37.2
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 2.2e-57 227.6 551 35.8
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 2.4e-56 224.2 464 37.3
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 9.1e-56 222.2 484 35.7
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 1.2e-55 221.9 620 32.1
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.9e-53 214.5 570 32.3
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 7.9e-52 209.1 566 32.7
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 2.8e-49 200.7 533 34.3
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 2.4e-48 197.6 569 33.0
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 2.0e-47 194.5 583 31.0
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 1.3e-46 191.8 383 36.3
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 3.8e-46 190.3 690 30.4
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 1.9e-45 188.0 497 32.4
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 7.2e-45 186.0 573 28.4
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.9e-43 180.3 266 42.9
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 1.8e-40 171.4 632 29.6
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 1.8e-40 171.4 632 29.6
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 1.2e-39 168.7 632 28.8
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 1.0e-38 165.6 634 29.2
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 7.2e-37 159.5 530 31.3
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 3.3e-34 150.6 384 34.4
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 7.5e-34 149.4 503 28.8
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 3.1e-32 144.1 681 26.6
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 2.0e-31 141.4 532 30.3
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 6.8e-27 126.3 502 27.1
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 1.7e-25 121.7 266 35.0
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 4.8e-25 120.2 227 37.0
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 2.3e-22 111.3 555 26.7
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 2.4e-16 91.3 259 31.3
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 9.5e-13 79.3 94 44.7
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 8.0e-12 76.3 65 56.9


User provided reference genes

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