Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 6.1e-82 307.4 148 100.0
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 3.0e-73 278.5 148 89.9
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 7.4e-72 273.9 149 87.9
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 2.8e-71 271.9 141 92.2
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 7.7e-69 263.8 150 84.7
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 6.5e-68 260.8 148 85.1
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 4.2e-67 258.1 148 81.1
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 5.5e-67 257.7 149 82.6
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 7.2e-67 257.3 148 83.1
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 9.4e-67 256.9 148 81.8
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 9.4e-67 256.9 150 81.3
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 1.2e-66 256.5 148 81.8
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 2.1e-66 255.8 147 81.0
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 8.0e-66 253.8 148 81.1
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.0e-65 253.4 139 84.2
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 1.8e-65 252.7 148 79.7
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 1.8e-65 252.7 149 80.5
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 2.3e-65 252.3 144 82.6
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 2.3e-65 252.3 146 79.5
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 3.0e-65 251.9 139 84.9
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 5.2e-65 251.1 146 82.2
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 5.2e-65 251.1 146 81.5
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 5.2e-65 251.1 146 80.8
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 8.8e-65 250.4 148 79.7
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 1.1e-64 250.0 144 81.9
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.1e-64 250.0 154 78.6
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.1e-64 250.0 148 78.4
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 1.5e-64 249.6 148 78.4
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 2.0e-64 249.2 146 77.4
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 2.6e-64 248.8 148 79.1
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 2.6e-64 248.8 148 77.0
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 3.3e-64 248.4 146 82.2
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 4.4e-64 248.1 148 76.4
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 4.4e-64 248.1 148 76.4
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 4.4e-64 248.1 148 77.7
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 4.4e-64 248.1 145 80.7
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 5.7e-64 247.7 148 77.0
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 7.4e-64 247.3 147 78.9
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 9.7e-64 246.9 148 76.4
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 9.7e-64 246.9 140 79.3
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 1.3e-63 246.5 139 80.6
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 1.7e-63 246.1 148 79.1
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 2.2e-63 245.7 140 80.0
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 3.7e-63 245.0 148 79.1
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 4.8e-63 244.6 148 78.4
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 6.3e-63 244.2 148 75.0
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.4e-62 243.0 148 77.7
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 1.4e-62 243.0 127 87.4
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 1.8e-62 242.7 148 77.0
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.8e-62 242.7 134 82.8
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 1.8e-62 242.7 148 77.7
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 3.1e-62 241.9 124 87.9
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 3.1e-62 241.9 133 83.5
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.1e-62 241.9 149 75.2
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.1e-62 241.9 148 77.7
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 3.1e-62 241.9 148 76.4
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 5.3e-62 241.1 149 75.8
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 5.3e-62 241.1 144 76.4
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 7.0e-62 240.7 148 75.0
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 7.0e-62 240.7 137 79.6
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 9.1e-62 240.4 150 74.0
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 1.2e-61 240.0 148 77.0
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 1.6e-61 239.6 148 76.4
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 2.6e-61 238.8 132 82.6
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 3.5e-61 238.4 146 74.0
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.5e-61 238.0 146 74.0
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 5.9e-61 237.7 126 84.9
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 1.0e-60 236.9 140 77.9
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 2.2e-60 235.7 145 78.6
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 3.8e-60 235.0 146 74.0
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 5.0e-60 234.6 130 80.8
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 1.6e-58 229.6 140 73.6
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 3.6e-58 228.4 148 72.3
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 8.0e-58 227.3 185 62.2
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 1.0e-57 226.9 148 72.3
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 1.0e-57 226.9 143 76.2
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 2.3e-57 225.7 146 71.9
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 5.2e-57 224.6 147 69.4
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 6.7e-57 224.2 162 66.7
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 8.8e-57 223.8 146 71.9
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 1.5e-56 223.0 146 74.0
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 2.0e-56 222.6 142 72.5
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 4.4e-56 221.5 146 70.5
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 4.4e-56 221.5 146 70.5
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 4.4e-56 221.5 146 71.2
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 9.7e-56 220.3 138 74.6
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 1.3e-55 219.9 146 69.9
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 2.2e-55 219.2 138 72.5
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 2.2e-55 219.2 146 70.5
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 2.8e-55 218.8 146 69.9
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 3.7e-55 218.4 146 70.5
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 4.8e-55 218.0 126 79.4
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 8.2e-55 217.2 146 69.9
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 8.2e-55 217.2 130 73.8
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 1.1e-54 216.9 137 70.8
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 1.1e-54 216.9 136 74.3
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 1.1e-54 216.9 136 74.3
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 5.3e-54 214.5 138 72.5
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 7.0e-54 214.2 209 55.0
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 1.6e-53 213.0 133 71.4
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 2.7e-53 212.2 133 72.2
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 4.5e-53 211.5 147 69.4
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 7.7e-53 210.7 135 68.9
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 2.9e-52 208.8 138 69.6
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 1.1e-51 206.8 121 77.7
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.1e-51 206.8 114 84.2
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 4.7e-50 201.4 127 76.4
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 4.7e-50 201.4 179 58.7
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 3.4e-48 195.3 132 65.9
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 5.4e-46 188.0 119 73.1
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 1.5e-43 179.9 94 85.1
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 1.9e-43 179.5 101 82.2
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.8e-42 175.6 96 83.3
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 1.4e-41 173.3 93 83.9
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 5.4e-38 161.4 96 80.2
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 2.0e-37 159.5 97 74.2
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 3.0e-33 145.6 95 73.7
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 1.1e-22 110.5 110 56.4
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 6.6e-20 101.3 66 75.8
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 9.9e-16 87.4 43 83.7
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 4.6e-13 78.6 52 67.3
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.2e-10 70.5 35 97.1
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 2.8e-10 69.3 51 62.7
MD13G1229600 Malus domestica HOM05D006458 ORTHO05D245398 4.9e-07 58.5 57 57.9
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.4e-06 57.0 52 55.8
A06p35450 Brassica napus HOM05D006458 ORTHO05D041657 3.2e-06 55.8 37 67.6
BraA06t26468Z Brassica rapa HOM05D006458 ORTHO05D041657 3.2e-06 55.8 37 67.6


User provided reference genes

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