Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 3.0e-73 278.5 147 100.0
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 2.0e-40 169.5 151 64.2
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 1.4e-38 163.3 150 64.0
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 7.0e-22 107.8 143 49.0
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 2.3e-20 102.8 152 48.7
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 2.9e-20 102.4 143 46.9
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 2.9e-20 102.4 148 45.3
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 3.3e-19 99.0 150 47.3
QL08p012979 Quercus lobata HOM05D006536 ORTHO05D005877 5.5e-19 98.2 141 43.3
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 3.6e-18 95.5 148 41.9
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 1.4e-17 93.6 143 39.9
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 1.4e-17 93.6 136 38.2
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.3e-17 92.8 130 47.7
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 6.8e-17 91.3 141 42.6
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 8.9e-17 90.9 135 40.7
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 1.5e-16 90.1 149 40.3
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 1.5e-16 90.1 135 40.0
Eucgr.F00976 Eucalyptus grandis HOM05D006536 ORTHO05D005877 7.5e-16 87.8 147 44.2
COL.COLO4_15402 Corchorus olitorius HOM05D006536 ORTHO05D005877 1.3e-15 87.0 141 41.8
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 1.7e-15 86.7 135 40.0
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 2.2e-15 86.3 145 35.9
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 8.3e-15 84.3 148 33.8
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 1.1e-14 84.0 141 39.0
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 2.4e-14 82.8 161 37.3
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 3.1e-14 82.4 135 38.5
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 5.4e-14 81.6 148 41.2
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 9.2e-14 80.9 146 35.6
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 1.2e-13 80.5 143 36.4
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.7e-13 79.3 148 41.9
Potri.011G134600 Populus trichocarpa HOM05D006536 ORTHO05D005877 3.5e-13 79.0 142 38.7
vmacro11762 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 4.5e-13 78.6 157 40.8
SHI27896 Sapria himalayana HOM05D006536 ORTHO05D005877 5.9e-13 78.2 127 40.2
Nn1g07020 Nelumbo nucifera HOM05D023228 ORTHO05D005877 7.8e-13 77.8 141 36.2
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 7.8e-13 77.8 127 38.6
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.0e-12 77.4 148 41.2
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 1.3e-12 77.0 144 36.8
Gorai.009G426600 Gossypium raimondii HOM05D015826 ORTHO05D005877 1.3e-12 77.0 148 35.1
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.3e-12 77.0 150 40.0
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 1.3e-12 77.0 147 36.7
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 1.7e-12 76.6 152 34.9
Manes.03G123600 Manihot esculenta HOM05D006536 ORTHO05D005877 2.3e-12 76.3 143 33.6
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 2.3e-12 76.3 148 39.2
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 2.9e-12 75.9 112 50.0
PGR083G0669 Punica granatum HOM05D006536 ORTHO05D005877 3.8e-12 75.5 161 40.4
CAN.G981.18 Capsicum annuum HOM05D006536 ORTHO05D005877 5.0e-12 75.1 130 40.8
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 5.0e-12 75.1 148 39.2
Sabra11G0120700 Salix brachista HOM05D006536 ORTHO05D005877 5.0e-12 75.1 140 37.1
Nitab4.5_0005213g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.6e-12 74.7 140 40.7
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 6.6e-12 74.7 145 37.9
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 8.6e-12 74.3 145 37.2
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 8.6e-12 74.3 154 37.0
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 8.6e-12 74.3 160 36.2
COL.COLO4_09580 Corchorus olitorius HOM05D015826 ORTHO05D005877 1.1e-11 73.9 149 30.9
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 1.5e-11 73.6 141 36.9
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 1.5e-11 73.6 146 39.0
MELO3C025418.2 Cucumis melo HOM05D006536 ORTHO05D005877 1.9e-11 73.2 145 40.0
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 1.9e-11 73.2 148 40.5
SHI26699 Sapria himalayana HOM05D006536 ORTHO05D005877 2.5e-11 72.8 114 39.5
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 3.3e-11 72.4 145 37.2
CAN.G981.17 Capsicum annuum HOM05D006536 ORTHO05D005877 4.3e-11 72.0 144 38.9
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 5.6e-11 71.6 100 41.0
Nn1g07017 Nelumbo nucifera HOM05D023228 ORTHO05D005877 5.6e-11 71.6 145 35.9
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 1.6e-10 70.1 152 32.9
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 2.8e-10 69.3 149 32.9
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 3.6e-10 68.9 146 35.6
EL10Ac4g07942 Beta vulgaris HOM05D009374 ORTHO05D005877 6.1e-10 68.2 144 35.4
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 6.1e-10 68.2 147 36.1
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.0e-09 67.4 148 39.9
Sabra02G0106400 Salix brachista HOM05D006536 ORTHO05D005877 1.4e-09 67.0 133 37.6
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 1.4e-09 67.0 153 33.3
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 1.8e-09 66.6 106 33.0
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.8e-09 66.6 159 32.1
Potri.011G134400 Populus trichocarpa HOM05D006536 ORTHO05D005877 3.1e-09 65.9 141 34.8
Potri.011G134500 Populus trichocarpa HOM05D006536 ORTHO05D005877 3.1e-09 65.9 141 34.8
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 3.1e-09 65.9 117 36.8
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 4.0e-09 65.5 144 34.0
ECA236G4404 Erigeron canadensis HOM05D009374 ORTHO05D012864 4.0e-09 65.5 154 40.3
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.0e-09 65.5 136 36.8
Gohir.D01G062500 Gossypium hirsutum HOM05D015826 ORTHO05D005877 6.8e-09 64.7 144 36.1
SHI33826 Sapria himalayana HOM05D006536 ORTHO05D005877 6.8e-09 64.7 70 47.1
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.8e-09 64.7 153 32.7
Gohir.A04G021300 Gossypium hirsutum HOM05D015826 ORTHO05D005877 8.9e-09 64.3 144 34.0
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 8.9e-09 64.3 103 37.9
Gorai.002G083200 Gossypium raimondii HOM05D015826 ORTHO05D005877 1.2e-08 63.9 144 36.1
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 1.2e-08 63.9 149 34.9
Gohir.A01G075200 Gossypium hirsutum HOM05D015826 ORTHO05D005877 1.5e-08 63.5 144 37.5
Hma1.2p1_0533F.1_g173670 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 1.5e-08 63.5 139 34.5
Lsat_1_v5_gn_7_106501 Lactuca sativa HOM05D009374 ORTHO05D012864 2.0e-08 63.2 152 37.5
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 2.6e-08 62.8 149 35.6
Gohir.D05G365366 Gossypium hirsutum HOM05D015826 ORTHO05D005877 3.4e-08 62.4 146 34.9
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.4e-08 62.0 148 37.2
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.4e-08 62.0 155 31.6
SGA_v2.0_scaffold20G09060 Striga asiatica HOM05D006536 ORTHO05D005877 7.5e-08 61.2 100 39.0
Manes.03G123318 Manihot esculenta HOM05D006536 ORTHO05D005877 9.8e-08 60.8 145 33.1
SGA_v2.0_scaffold75G24748 Striga asiatica HOM05D006536 ORTHO05D005877 9.8e-08 60.8 143 33.6
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 1.3e-07 60.5 70 37.1
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 1.3e-07 60.5 148 33.1
Lsat_1_v5_gn_5_5901 Lactuca sativa HOM05D009374 ORTHO05D005877 1.3e-07 60.5 163 31.9
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.7e-07 60.1 106 41.5
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.7e-07 60.1 155 31.0
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 1.7e-07 60.1 140 34.3
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 2.2e-07 59.7 97 34.0
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 2.9e-07 59.3 146 35.6
Manes.03G123501 Manihot esculenta HOM05D006536 ORTHO05D005877 3.7e-07 58.9 153 31.4
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 4.9e-07 58.5 158 36.1
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 6.4e-07 58.2 145 32.4
PGR083G0622 Punica granatum HOM05D006536 ORTHO05D005877 6.4e-07 58.2 142 31.7
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 8.3e-07 57.8 143 34.3
Ah.06g183000 Amaranthus hybridus HOM05D001264 ORTHO05D001167 1.1e-06 57.4 144 34.0
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.4e-06 57.0 146 32.9
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 1.4e-06 57.0 158 30.4
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 1.9e-06 56.6 142 33.1
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.9e-06 56.6 156 30.1
Nitab4.5_0003461g0020 Nicotiana tabacum HOM05D003749 ORTHO05D004421 1.9e-06 56.6 144 39.6
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.9e-06 56.6 155 30.3
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.9e-06 56.6 155 30.3
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.9e-06 56.6 155 30.3
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 3.2e-06 55.8 163 30.1
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 3.2e-06 55.8 158 37.3
Solyc08g080490.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 3.2e-06 55.8 146 32.2
ATR0686G133 Amborella trichopoda HOM05D031825 ORTHO05D005877 5.4e-06 55.1 138 35.5
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 7.0e-06 54.7 149 32.9
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 7.0e-06 54.7 142 32.4
ECA236G3141 Erigeron canadensis HOM05D009374 ORTHO05D012864 7.0e-06 54.7 165 36.4
Migut.J01036 Erythranthe guttata HOM05D006536 ORTHO05D005877 7.0e-06 54.7 156 33.3
MBI18_g21250_MAGBIO Magnolia biondii HOM05D006536 ORTHO05D005877 7.0e-06 54.7 105 39.0
ECA236G0204 Erigeron canadensis HOM05D009374 ORTHO05D012864 9.2e-06 54.3 162 37.7
Gohir.D05G365500 Gossypium hirsutum HOM05D015826 ORTHO05D005877 9.2e-06 54.3 69 37.7


User provided reference genes

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