Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 6.1e-99 364.4 217 100.0
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.1e-55 220.7 227 69.6
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 9.6e-52 207.6 220 62.3
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 1.4e-50 203.8 224 66.5
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 2.3e-37 159.8 229 54.6
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 6.7e-37 158.3 230 51.3
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 1.5e-36 157.1 233 53.6
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 9.6e-36 154.5 231 49.4
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 6.2e-35 151.8 234 52.6
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 4.0e-34 149.1 242 54.5
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 5.3e-34 148.7 230 50.4
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 1.2e-33 147.5 239 52.3
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 1.5e-33 147.1 238 53.8
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.5e-33 147.1 238 53.8
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 2.0e-33 146.7 238 54.2
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 5.8e-33 145.2 231 50.6
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 5.8e-33 145.2 231 50.6
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 7.6e-33 144.8 228 51.3
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 1.0e-32 144.4 241 42.3
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 3.8e-32 142.5 231 48.5
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 1.9e-31 140.2 220 50.5
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 3.2e-31 139.4 231 48.1
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 5.5e-31 138.7 238 54.2
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 2.1e-30 136.7 235 51.1
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 1.0e-29 134.4 239 48.5
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 8.7e-29 131.3 256 49.2
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 8.7e-29 131.3 221 40.7
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 1.5e-28 130.6 233 45.5
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 1.9e-28 130.2 266 49.2
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 4.3e-28 129.0 234 47.0
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 4.3e-28 129.0 227 48.9
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 4.3e-28 129.0 224 42.4
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 4.3e-28 129.0 232 47.0
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 5.7e-28 128.6 139 71.2
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 1.6e-27 127.1 240 42.5
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 3.7e-27 125.9 232 48.7
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 1.4e-26 124.0 238 46.6
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 1.8e-26 123.6 227 45.4
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 5.3e-26 122.1 240 45.0
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 3.4e-25 119.4 227 45.8
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 4.5e-25 119.0 215 49.8
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 4.5e-25 119.0 224 50.9
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 2.2e-24 116.7 242 47.9
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 7.2e-23 111.7 210 37.6
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 9.3e-23 111.3 239 43.1
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 3.6e-22 109.4 232 42.2
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 6.1e-22 108.6 237 39.7
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 2.3e-21 106.7 200 44.0
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 3.0e-21 106.3 200 44.0
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 3.9e-21 105.9 229 43.7
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 3.9e-21 105.9 225 43.1
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 2.5e-20 103.2 221 44.3
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 2.5e-20 103.2 219 46.6
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 3.3e-20 102.8 190 51.1
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 5.7e-20 102.1 214 47.2
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 9.7e-20 101.3 237 42.2
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 2.8e-19 99.8 238 33.2
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 3.7e-19 99.4 219 43.4
Duzib170G0657 Durio zibethinus HOM05D007784 ORTHO05D008654 8.2e-19 98.2 221 47.5
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 1.8e-18 97.1 224 38.4
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 5.3e-18 95.5 236 39.8
Nn1g04167 Nelumbo nucifera HOM05D007784 ORTHO05D008654 2.0e-17 93.6 180 47.2
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 3.4e-17 92.8 178 48.9
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 3.4e-17 92.8 237 38.8
TPR.G18874 Trifolium pratense HOM05D007784 ORTHO05D008654 1.0e-16 91.3 166 41.6
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 1.7e-16 90.5 227 38.3
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 4.2e-15 85.9 76 57.9
Sed0023140 Sechium edule HOM05D007784 ORTHO05D008654 7.2e-15 85.1 55 74.5
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 1.2e-14 84.3 218 33.9
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 1.2e-14 84.3 191 36.1
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 1.6e-14 84.0 238 41.2
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 2.7e-14 83.2 209 39.2
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 4.6e-14 82.4 210 44.8
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 1.8e-13 80.5 220 36.8
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 3.9e-13 79.3 255 29.8
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 6.7e-13 78.6 187 39.0
EL10Ac4g08222 Beta vulgaris HOM05D007784 ORTHO05D008654 1.1e-12 77.8 264 39.0
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 1.1e-12 77.8 217 33.2
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 2.0e-12 77.0 203 43.8
AUR62036175 Chenopodium quinoa HOM05D007784 ORTHO05D008654 2.6e-12 76.6 239 31.8
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 5.7e-12 75.5 209 32.5
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 1.1e-10 71.2 208 35.6
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 1.8e-10 70.5 208 36.1
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 3.1e-10 69.7 201 39.8
AUR62019455 Chenopodium quinoa HOM05D007784 ORTHO05D008654 4.1e-10 69.3 260 40.0
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 4.1e-10 69.3 207 36.2
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 6.9e-10 68.6 208 36.5
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 6.9e-10 68.6 210 33.8
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 6.9e-10 68.6 208 36.5
Eucgr.F03301 Eucalyptus grandis HOM05D007784 ORTHO05D008654 6.9e-10 68.6 127 33.9
CARHR043380 Cardamine hirsuta HOM05D009851 ORTHO05D008654 1.5e-09 67.4 253 27.3
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 1.5e-09 67.4 213 42.3
A06p01160 Brassica napus HOM05D009851 ORTHO05D008654 2.6e-09 66.6 243 28.4
ECA234G3343 Erigeron canadensis HOM05D007784 ORTHO05D008654 4.5e-09 65.9 213 36.2
Thhalv10012165m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 4.5e-09 65.9 271 31.4
Sp1g39710 Schrenkiella parvula HOM05D009851 ORTHO05D008654 4.5e-09 65.9 270 28.9
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 1.7e-08 63.9 65 56.9
BcaC08g43508 Brassica carinata HOM05D009851 ORTHO05D008654 1.7e-08 63.9 242 27.3
C06p08940 Brassica napus HOM05D009851 ORTHO05D008654 1.7e-08 63.9 242 27.3
BolC6t35972H Brassica oleracea HOM05D009851 ORTHO05D008654 1.7e-08 63.9 242 27.3
BraA06t23343Z Brassica rapa HOM05D009851 ORTHO05D008654 2.2e-08 63.5 242 27.7
Carub.0001s4232 Capsella rubella HOM05D009851 ORTHO05D008654 2.9e-08 63.2 276 26.4
AT1G53163 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 6.5e-08 62.0 283 26.1
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 1.1e-07 61.2 65 53.8
BcaB07g33353 Brassica carinata HOM05D009851 ORTHO05D008654 1.1e-07 61.2 61 55.7
DCAR_019564 Daucus carota HOM05D007784 ORTHO05D008654 1.1e-07 61.2 206 35.4
SalBow8G3696 Salvia bowleyana HOM05D007784 ORTHO05D008654 1.4e-07 60.8 76 53.9
SGA_v2.0_scaffold73G24239 Striga asiatica HOM05D007784 ORTHO05D008654 4.2e-07 59.3 224 29.5
Ah.06g184500 Amaranthus hybridus HOM05D007784 ORTHO05D008654 9.4e-07 58.2 238 29.8
Rhsim04G0022200 Rhododendron simsii HOM05D058066 ORTHO05D008654 3.6e-06 56.2 95 42.1
DCAR_019565 Daucus carota HOM05D007784 ORTHO05D008654 4.7e-06 55.8 215 40.9


User provided reference genes

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