Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 7.3e-65 250.8 160 100.0
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 1.1e-36 157.1 160 73.1
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 3.0e-34 149.1 123 65.9
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 1.5e-33 146.7 116 65.5
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 5.6e-33 144.8 121 64.5
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 7.3e-33 144.4 118 64.4
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 2.1e-32 142.9 161 71.4
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 2.1e-32 142.9 116 66.4
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 3.1e-31 139.0 155 69.0
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 5.3e-31 138.3 121 61.2
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 6.9e-31 137.9 114 64.9
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 4.5e-30 135.2 118 62.7
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 5.8e-30 134.8 118 56.8
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 7.6e-30 134.4 121 62.8
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 9.9e-30 134.0 118 61.9
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 1.3e-29 133.7 119 59.7
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 7.1e-28 127.9 120 58.3
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 9.3e-28 127.5 119 58.0
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.6e-27 126.7 120 58.3
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 2.1e-27 126.3 131 58.8
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 2.7e-27 125.9 120 57.5
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 2.3e-26 122.9 125 56.0
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.3e-26 122.9 116 56.9
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 3.0e-26 122.5 126 53.2
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 5.1e-26 121.7 121 57.0
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 5.1e-26 121.7 125 49.6
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 6.7e-26 121.3 121 57.0
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 6.7e-26 121.3 162 61.7
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 6.7e-26 121.3 131 51.9
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 1.1e-25 120.6 112 59.8
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 1.1e-25 120.6 122 55.7
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 1.5e-25 120.2 122 52.5
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 1.5e-25 120.2 95 63.2
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.5e-25 120.2 121 57.0
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 4.3e-25 118.6 124 55.6
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 4.3e-25 118.6 123 52.8
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 5.6e-25 118.2 119 54.6
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 9.6e-25 117.5 125 51.2
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 1.3e-24 117.1 121 57.0
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 1.6e-24 116.7 160 64.4
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 2.1e-24 116.3 125 53.6
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 2.1e-24 116.3 124 54.0
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 2.1e-24 116.3 158 60.8
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 2.8e-24 115.9 124 54.0
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 3.7e-24 115.5 122 52.5
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 6.2e-24 114.8 122 55.7
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 8.1e-24 114.4 168 59.5
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 1.1e-23 114.0 128 55.5
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.1e-23 114.0 126 49.2
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 1.4e-23 113.6 115 53.0
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 1.4e-23 113.6 160 60.6
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 1.4e-23 113.6 129 51.9
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 1.8e-23 113.2 123 50.4
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 1.8e-23 113.2 123 50.4
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.8e-23 113.2 86 62.8
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 3.1e-23 112.5 123 50.4
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 3.1e-23 112.5 123 50.4
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 3.1e-23 112.5 123 50.4
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 3.1e-23 112.5 160 62.5
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 4.0e-23 112.1 124 51.6
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 4.0e-23 112.1 125 51.2
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 5.3e-23 111.7 123 48.0
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 6.9e-23 111.3 138 52.2
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 6.9e-23 111.3 124 47.6
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 6.9e-23 111.3 129 54.3
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 6.9e-23 111.3 129 54.3
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 6.9e-23 111.3 129 54.3
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 9.0e-23 110.9 117 52.1
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.2e-22 110.5 129 54.3
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.2e-22 110.5 123 48.8
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.5e-22 110.2 129 53.5
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 2.0e-22 109.8 121 52.9
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.0e-22 109.8 129 53.5
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 2.6e-22 109.4 123 52.0
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 3.4e-22 109.0 129 54.3
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 3.4e-22 109.0 161 60.2
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 7.6e-22 107.8 83 63.9
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 4.9e-21 105.1 92 57.6
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 1.1e-20 104.0 126 43.7
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.1e-20 104.0 129 48.8
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.9e-20 103.2 129 48.8
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.9e-20 103.2 129 48.8
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.5e-20 102.8 129 50.4
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 7.1e-20 101.3 93 52.7
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 9.3e-20 100.9 152 43.4
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 9.3e-20 100.9 122 48.4
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 4.6e-19 98.6 117 45.3
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 1.0e-18 97.4 112 47.3
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 1.8e-18 96.7 118 48.3
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.0e-18 95.9 117 47.9
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 3.0e-18 95.9 117 48.7
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 6.7e-18 94.7 122 43.4
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 8.7e-18 94.4 86 57.0
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 8.7e-18 94.4 68 66.2
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 5.6e-17 91.7 56 66.1
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 1.4e-15 87.0 86 52.3
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.4e-15 87.0 120 44.2
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 5.3e-15 85.1 125 39.2
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 1.7e-13 80.1 104 41.3
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 4.9e-13 78.6 108 38.9
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 1.5e-09 67.0 63 46.0
Sabra10G0176000 Salix brachista HOM05D002014 ORTHO05D001958 3.1e-07 59.3 84 40.5
Sabra10G0176400 Salix brachista HOM05D002014 ORTHO05D001958 3.1e-07 59.3 84 40.5
Nn1g07227 Nelumbo nucifera HOM05D002014 ORTHO05D001958 2.0e-06 56.6 119 39.5
HPP92_020058 Vanilla planifolia HOM05D003240 ORTHO05D009426 2.0e-06 56.6 64 46.9
Potri.010G228100 Populus trichocarpa HOM05D002014 ORTHO05D001958 3.4e-06 55.8 87 39.1
Rhsim06G0199500 Rhododendron simsii HOM05D003240 ORTHO05D009426 3.4e-06 55.8 124 35.5
RcHm_v2.0_Chr5g0040841 Rosa chinensis HOM05D002014 ORTHO05D001958 5.9e-06 55.1 113 32.7


User provided reference genes

Program Settings