Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 2.1e-82 308.9 151 100.0
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 8.4e-71 270.4 153 86.3
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 3.8e-63 245.0 145 78.6
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 8.4e-63 243.8 149 73.2
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 1.9e-62 242.7 145 76.6
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.9e-62 242.7 145 76.6
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.4e-62 242.3 145 75.9
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 9.3e-62 240.4 145 75.9
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 3.0e-60 235.3 147 74.8
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 6.7e-60 234.2 152 71.7
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 4.3e-59 231.5 143 78.3
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.6e-58 229.6 152 73.7
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 6.2e-58 227.6 142 71.1
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 8.1e-58 227.3 144 75.0
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 1.1e-57 226.9 142 71.1
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 1.1e-57 226.9 145 73.1
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.8e-57 226.1 152 72.4
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 2.4e-57 225.7 145 70.3
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 3.1e-57 225.3 261 48.3
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 9.0e-57 223.8 144 75.7
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 4.5e-56 221.5 143 69.9
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 4.5e-56 221.5 143 69.9
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 5.8e-56 221.1 145 73.8
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 5.8e-56 221.1 138 72.5
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 7.6e-56 220.7 148 68.2
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 1.7e-55 219.5 148 70.3
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 2.9e-55 218.8 144 70.8
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 1.4e-54 216.5 143 71.3
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 1.9e-54 216.1 148 72.3
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 4.2e-54 214.9 144 69.4
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 4.2e-54 214.9 142 72.5
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 5.5e-54 214.5 150 70.7
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 7.1e-54 214.2 142 68.3
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 9.3e-54 213.8 139 70.5
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 9.3e-54 213.8 148 66.9
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 9.3e-54 213.8 148 66.9
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 1.2e-53 213.4 153 69.9
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 1.2e-53 213.4 144 68.1
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 6.0e-53 211.1 142 70.4
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 6.0e-53 211.1 143 67.1
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 5.1e-52 208.0 140 67.1
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 6.7e-52 207.6 152 66.4
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 6.7e-52 207.6 144 70.8
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 8.7e-52 207.2 147 67.3
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.1e-51 206.8 155 67.7
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 1.5e-51 206.5 143 65.7
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.9e-51 206.1 139 66.9
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 1.9e-51 206.1 153 64.1
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 2.5e-51 205.7 139 66.9
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 3.3e-51 205.3 146 69.2
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 4.3e-51 204.9 143 69.9
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 4.8e-50 201.4 152 65.8
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 4.8e-50 201.4 167 60.5
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 8.1e-50 200.7 146 68.5
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 1.1e-49 200.3 113 79.6
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 2.4e-49 199.1 144 66.7
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 2.4e-49 199.1 118 78.0
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 5.3e-49 198.0 143 68.5
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 5.3e-49 198.0 148 64.9
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 9.0e-49 197.2 119 75.6
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 9.0e-49 197.2 184 56.5
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.2e-48 196.8 152 65.1
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 7.6e-48 194.1 135 63.7
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 7.6e-48 194.1 146 67.8
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.7e-47 193.0 135 63.7
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 3.8e-47 191.8 135 63.0
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 1.9e-46 189.5 111 82.0
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 9.3e-46 187.2 136 65.4
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 4.6e-45 184.9 123 72.4
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 1.0e-44 183.7 120 70.0
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.8e-44 183.0 128 69.5
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 2.3e-44 182.6 137 60.6
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 3.9e-44 181.8 150 61.3
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.1e-44 181.4 141 60.3
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 1.1e-43 180.3 159 57.2
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 9.6e-43 177.2 115 72.2
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 1.6e-42 176.4 124 64.5
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 8.2e-42 174.1 147 61.2
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 1.1e-41 173.7 175 50.9
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 7.6e-40 167.5 103 75.7
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 1.0e-39 167.2 103 69.9
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 6.5e-39 164.5 112 69.6
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 3.2e-38 162.2 119 68.9
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 9.3e-38 160.6 115 68.7
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 3.6e-37 158.7 164 55.5
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.3e-36 156.8 111 62.2
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 1.5e-35 153.3 131 61.1
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.2e-34 149.4 80 80.0
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.8e-33 146.4 152 52.6
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.3e-33 144.8 108 68.5
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 5.9e-32 141.4 140 49.3
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.7e-31 139.8 163 46.6
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 8.5e-31 137.5 89 65.2
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 8.5e-31 137.5 101 58.4
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 1.4e-30 136.7 153 51.0
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 1.9e-30 136.3 144 45.8
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 4.2e-30 135.2 99 64.6
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 1.4e-28 130.2 92 69.6
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 1.8e-28 129.8 90 72.2
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 2.3e-28 129.4 115 51.3
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 5.1e-28 128.3 111 55.0
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 5.1e-28 128.3 83 69.9
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 2.0e-27 126.3 115 60.0
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 1.1e-25 120.6 147 44.9
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 4.1e-25 118.6 80 70.0
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-24 117.1 117 56.4
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 1.4e-22 110.2 133 44.4
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 4.2e-22 108.6 118 41.5
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 2.7e-21 105.9 81 60.5
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 1.4e-20 103.6 142 39.4
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.8e-20 103.2 85 60.0
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 5.2e-20 101.7 81 61.7
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 4.8e-18 95.1 133 44.4
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.2e-13 80.5 58 65.5
Haze_07922 Corylus avellana HOM05D007031 ORTHO05D008815 1.8e-09 66.6 43 81.4
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 4.5e-08 62.0 45 71.1
Haze_26654 Corylus avellana HOM05D002397 ORTHO05D002667 1.1e-06 57.4 82 37.8
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 1.9e-06 56.6 42 61.9


User provided reference genes

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