Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G108600 Carya illinoinensis HOM05D009510 ORTHO05D010335 1.2e-95 353.2 181 100.0
Cfa012745 Carpinus fangiana HOM05D009510 ORTHO05D010335 3.7e-25 119.0 147 53.7
Potri.001G122600 Populus trichocarpa HOM05D009510 ORTHO05D010335 1.2e-20 104.0 189 40.7
Prupe.5G072500 Prunus persica HOM05D015618 ORTHO05D010335 3.6e-20 102.4 179 39.7
Manes.01G079300 Manihot esculenta HOM05D009510 ORTHO05D010335 6.8e-19 98.2 181 36.5
GSVIVG01001306001 Vitis vinifera HOM05D009510 ORTHO05D010335 9.9e-18 94.4 190 37.4
QL12p012683 Quercus lobata HOM05D009510 ORTHO05D010335 1.3e-17 94.0 114 51.8
Dinv21618 Davidia involucrata HOM05D009510 ORTHO05D010335 2.2e-17 93.2 189 38.6
Dinv39126 Davidia involucrata HOM05D009510 ORTHO05D010335 2.4e-16 89.7 194 36.6
Sabra01G0094500 Salix brachista HOM05D009510 ORTHO05D010335 2.7e-15 86.3 185 35.7
Atru.chr9.1339 Acer truncatum HOM05D009510 ORTHO05D010335 3.5e-15 85.9 189 36.0
Hma1.2p1_0753F.1_g212990 Hydrangea macrophylla HOM05D009510 ORTHO05D010335 5.1e-14 82.0 191 34.0
Thecc.03G254000 Theobroma cacao HOM05D009510 ORTHO05D010335 2.5e-13 79.7 184 32.6
Glyma.01G210300 Glycine max HOM05D013054 ORTHO05D010335 4.3e-13 79.0 179 34.6
Duzib068G0669 Durio zibethinus HOM05D009510 ORTHO05D010335 7.3e-13 78.2 180 36.7
Glyma.11G031700 Glycine max HOM05D013054 ORTHO05D010335 2.8e-12 76.3 173 34.1
MD00G1115000 Malus domestica HOM05D015618 ORTHO05D010335 2.4e-11 73.2 181 33.7
Duzib205G1076 Durio zibethinus HOM05D009510 ORTHO05D010335 3.1e-11 72.8 177 33.3
Gohir.A08G172100 Gossypium hirsutum HOM05D009510 ORTHO05D010335 5.2e-11 72.0 184 35.9
Gohir.D08G190400 Gossypium hirsutum HOM05D009510 ORTHO05D010335 6.8e-11 71.6 184 35.3
Phvul.002G062100 Phaseolus vulgaris HOM05D013054 ORTHO05D010335 1.5e-10 70.5 181 34.8
Gorai.004G200500 Gossypium raimondii HOM05D009510 ORTHO05D010335 2.0e-10 70.1 184 35.3
VMungo1215G2077 Vigna mungo HOM05D013054 ORTHO05D010335 2.6e-10 69.7 184 35.3
DCAR_027783 Daucus carota HOM05D009510 ORTHO05D010335 3.4e-10 69.3 177 33.3
Ciclev10022879m.g Citrus clementina HOM05D009510 ORTHO05D010335 7.6e-10 68.2 184 32.1
Haze_07883 Corylus avellana HOM05D009510 ORTHO05D010335 2.2e-09 66.6 52 65.4
Medtr5g012400 Medicago truncatula HOM05D013054 ORTHO05D010335 2.2e-09 66.6 178 34.8
Nitab4.5_0000312g0200 Nicotiana tabacum HOM05D012984 ORTHO05D010335 3.2e-08 62.8 181 30.9
arahy.Tifrunner.gnm1.ann1.52RI3H Arachis hypogaea HOM05D013054 ORTHO05D010335 4.2e-08 62.4 185 32.4
Gohir.A12G220001 Gossypium hirsutum HOM05D009510 ORTHO05D010335 5.4e-08 62.0 178 32.0
RcHm_v2.0_Chr7g0202891 Rosa chinensis HOM05D015618 ORTHO05D010335 7.1e-08 61.6 195 31.8
Migut.A00962 Erythranthe guttata HOM05D012984 ORTHO05D010335 1.6e-07 60.5 91 38.5
FvH4_5g00070 Fragaria vesca HOM05D015618 ORTHO05D010335 2.7e-07 59.7 200 30.5
Gohir.D12G222201 Gossypium hirsutum HOM05D009510 ORTHO05D010335 2.7e-07 59.7 179 31.8
HanXRQChr03g0088641 Helianthus annuus HOM05D012984 ORTHO05D010335 4.6e-07 58.9 182 30.8
Lj2g0024641 Lotus japonicus HOM05D013054 ORTHO05D010335 4.6e-07 58.9 180 33.9
PGR042G1660 Punica granatum HOM05D015618 ORTHO05D010335 6.0e-07 58.5 82 47.6
arahy.Tifrunner.gnm1.ann1.D7EMLG Arachis hypogaea HOM05D013054 ORTHO05D010335 1.3e-06 57.4 188 31.9
vmacro00232 Vaccinium macrocarpon HOM05D009510 ORTHO05D010335 1.3e-06 57.4 64 53.1
CSS0028488 Camellia sinensis var. sinensis HOM05D009510 ORTHO05D010335 1.7e-06 57.0 72 51.4
DCAR_006823 Daucus carota HOM05D009510 ORTHO05D010335 2.3e-06 56.6 185 29.2
FAN13G2980 Fragaria x ananassa HOM05D015618 ORTHO05D010335 3.9e-06 55.8 192 28.6
Solyc08g078840.3 Solanum lycopersicum HOM05D012984 ORTHO05D010335 3.9e-06 55.8 174 31.6
FAN04G3221 Fragaria x ananassa HOM05D015618 ORTHO05D010335 5.1e-06 55.5 200 30.0
Gorai.008G238200 Gossypium raimondii HOM05D009510 ORTHO05D010335 5.1e-06 55.5 190 34.2
Psat0s3774g0040 Pisum sativum HOM05D013054 ORTHO05D010335 5.1e-06 55.5 53 54.7
PGSC0003DMG400004801 Solanum tuberosum HOM05D012984 ORTHO05D010335 5.1e-06 55.5 182 30.8
ECA240G2875 Erigeron canadensis HOM05D012984 ORTHO05D010335 6.6e-06 55.1 115 39.1
CAN.G1218.11 Capsicum annuum HOM05D012984 ORTHO05D010335 8.7e-06 54.7 105 41.0


User provided reference genes

Program Settings