Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 5.0e-171 604.4 309 100.0
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 9.8e-26 121.7 313 35.1
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.8e-20 103.6 321 30.2
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 4.7e-20 102.8 302 33.8
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 9.9e-18 95.1 321 29.9
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 2.9e-17 93.6 322 32.6
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.9e-17 93.6 300 31.0
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 2.7e-15 87.0 301 30.2
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.7e-14 84.3 321 28.3
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 8.6e-14 82.0 329 28.3
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.1e-13 81.6 203 33.0
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.5e-13 80.5 329 27.7
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 3.3e-13 80.1 228 32.9
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 9.6e-13 78.6 216 30.1
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.6e-12 77.8 305 26.6
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 6.2e-12 75.9 317 27.8
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 1.1e-11 75.1 231 27.7
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 1.4e-11 74.7 266 30.1
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 1.8e-11 74.3 285 27.7
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 1.8e-11 74.3 310 27.1
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.8e-11 74.3 268 26.1
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 2.4e-11 73.9 268 26.1
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 3.1e-11 73.6 286 28.0
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.0e-11 73.2 232 33.2
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 4.0e-11 73.2 318 27.4
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 5.2e-11 72.8 224 29.9
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 8.9e-11 72.0 222 31.5
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 1.2e-10 71.6 202 33.7
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 2.0e-10 70.9 201 34.3
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 2.6e-10 70.5 321 27.4
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 3.4e-10 70.1 301 27.6
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 4.4e-10 69.7 254 29.9
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 7.6e-10 68.9 303 27.4
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 7.6e-10 68.9 162 35.8
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 1.3e-09 68.2 312 26.9
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 2.9e-09 67.0 221 29.0
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 1.1e-08 65.1 305 27.2
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.4e-08 64.7 210 31.4
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.4e-08 63.9 279 27.6
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 5.4e-08 62.8 321 27.4
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 5.4e-08 62.8 235 28.9
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 5.4e-08 62.8 318 27.4
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 7.1e-08 62.4 314 25.8
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 7.1e-08 62.4 234 27.4
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 7.1e-08 62.4 239 28.0
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.2e-07 61.6 276 27.2
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 1.2e-07 61.6 285 26.3
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 2.1e-07 60.8 315 26.7
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 2.1e-07 60.8 151 31.1
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 2.7e-07 60.5 276 27.2
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 3.5e-07 60.1 218 28.4
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 4.6e-07 59.7 279 26.9
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 6.0e-07 59.3 226 30.1
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 6.0e-07 59.3 308 26.6
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 6.0e-07 59.3 84 40.5
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 6.0e-07 59.3 179 33.5
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.8e-07 58.9 276 27.2
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.8e-07 58.9 279 26.5
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.0e-06 58.5 153 31.4
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.3e-06 57.4 286 25.9
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 2.3e-06 57.4 108 32.4
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.3e-06 57.4 175 30.3
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 5.1e-06 56.2 206 29.6
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 8.7e-06 55.5 175 30.3


User provided reference genes

Program Settings