Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 2.0e-104 382.5 196 100.0
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 8.3e-87 323.9 190 90.0
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 1.5e-48 196.8 182 55.5
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 2.6e-48 196.1 182 54.9
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 9.9e-48 194.1 182 58.8
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 4.9e-47 191.8 175 57.1
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 1.1e-46 190.7 176 54.0
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 1.1e-46 190.7 176 54.0
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 4.2e-46 188.7 179 57.0
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 7.3e-43 177.9 180 54.4
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 1.8e-41 173.3 167 56.3
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 1.6e-37 160.2 170 48.2
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 2.1e-37 159.8 185 45.4
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 2.0e-32 143.3 160 46.9
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 2.0e-32 143.3 166 50.6
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 6.4e-31 138.3 182 42.9
SGA_v2.0_scaffold173G39118 Striga asiatica HOM05D010605 ORTHO05D010031 5.1e-28 128.6 172 40.7
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 1.1e-27 127.5 160 44.4
Oeu042370.1 Olea europaea HOM05D010605 ORTHO05D010031 2.5e-27 126.3 167 42.5
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 9.6e-27 124.4 180 38.3
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 9.4e-14 81.3 175 33.7
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 3.9e-12 75.9 176 33.0
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 1.1e-11 74.3 179 31.3
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 1.1e-11 74.3 164 30.5
Cfa016331 Carpinus fangiana HOM05D015404 ORTHO05D011570 2.0e-11 73.6 176 28.4
QL09p011993 Quercus lobata HOM05D015404 ORTHO05D011570 2.2e-10 70.1 163 28.8
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 4.8e-10 68.9 186 25.3
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 1.8e-09 67.0 204 27.0
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 5.3e-09 65.5 223 26.0
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 6.9e-09 65.1 95 40.0
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 2.0e-08 63.5 201 25.9
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 3.4e-08 62.8 189 28.0
Pp3c8_14250 Physcomitrium patens HOM05D011172 ORTHO05D010031 4.5e-08 62.4 183 28.4
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 7.7e-08 61.6 70 48.6
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 7.7e-08 61.6 178 25.8
CiPaw.05G259800 Carya illinoinensis HOM05D015404 ORTHO05D011570 1.0e-07 61.2 171 26.3
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 1.0e-07 61.2 194 24.7
RcHm_v2.0_Chr1g0379631 Rosa chinensis HOM05D015404 ORTHO05D011570 2.2e-07 60.1 97 36.1
Manes.16G117600 Manihot esculenta HOM05D017842 ORTHO05D020741 3.8e-07 59.3 161 23.6
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 3.8e-07 59.3 177 28.2
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 5.0e-07 58.9 70 44.3
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 5.0e-07 58.9 85 43.5
Thecc.03G188800 Theobroma cacao HOM05D015404 ORTHO05D010031 8.5e-07 58.2 93 36.6
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 1.9e-06 57.0 69 44.9
CiPaw.08G129800 Carya illinoinensis HOM05D015404 ORTHO05D011570 2.5e-06 56.6 176 25.0
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 5.5e-06 55.5 93 35.5


User provided reference genes

Program Settings