Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 8.7e-241 837.0 584 100.0
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 6.0e-149 531.9 524 75.6
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 3.6e-146 522.7 610 65.6
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 3.2e-142 509.6 582 62.7
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 4.1e-142 509.2 580 64.8
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 2.1e-141 506.9 583 65.0
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 2.5e-139 500.0 572 66.1
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 1.6e-138 497.3 503 76.9
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 4.7e-138 495.7 580 62.6
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 3.4e-136 489.6 569 69.4
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 5.8e-136 488.8 567 63.8
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 9.9e-136 488.0 607 59.5
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 9.9e-136 488.0 612 54.4
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 6.4e-135 485.3 596 51.5
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 7.8e-133 478.4 579 64.9
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 9.6e-131 471.5 590 63.6
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.8e-130 469.9 600 45.7
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 3.6e-130 469.5 582 53.3
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 3.6e-130 469.5 597 53.3
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 2.4e-129 466.8 602 53.7
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 3.1e-129 466.5 595 50.4
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 1.5e-128 464.2 601 64.1
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 2.0e-128 463.8 571 57.4
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 2.0e-128 463.8 587 65.9
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 9.3e-126 454.9 581 57.5
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 2.7e-125 453.4 575 62.3
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 6.0e-125 452.2 590 51.0
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 1.6e-122 444.1 584 61.1
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 1.5e-120 437.6 583 60.7
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 4.5e-120 436.0 571 62.2
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 5.8e-120 435.6 583 54.7
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 7.6e-120 435.3 583 60.5
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 1.7e-119 434.1 578 58.0
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 1.1e-118 431.4 568 63.0
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 3.5e-117 426.4 581 60.1
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 4.6e-117 426.0 576 58.5
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 3.0e-116 423.3 571 64.1
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 2.5e-115 420.2 581 63.2
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.3e-114 417.9 589 52.6
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 3.7e-114 416.4 571 64.3
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 8.1e-114 415.2 569 51.8
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 1.8e-113 414.1 576 61.6
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 9.0e-113 411.8 581 63.5
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 7.6e-112 408.7 581 62.8
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.0e-111 408.3 610 54.8
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 1.3e-111 407.9 575 56.3
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 2.2e-111 407.1 603 59.4
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 4.9e-111 406.0 571 55.3
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 1.1e-110 404.8 550 59.8
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 5.5e-110 402.5 588 56.5
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 3.5e-109 399.8 600 54.0
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 1.1e-107 394.8 571 62.5
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 1.5e-107 394.4 586 60.2
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 2.8e-106 390.2 587 56.2
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 6.2e-106 389.0 602 57.0
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 1.8e-105 387.5 580 57.9
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 5.3e-105 386.0 578 57.8
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 1.0e-103 381.7 576 61.5
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.3e-103 381.3 566 58.7
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 1.3e-103 381.3 596 60.4
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 1.1e-102 378.3 572 59.6
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 4.6e-101 372.9 590 56.1
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 1.5e-99 367.9 553 55.5
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 3.3e-99 366.7 608 49.8
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 4.3e-99 366.3 599 52.9
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 4.3e-99 366.3 585 55.7
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 1.6e-98 364.4 580 54.7
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 1.6e-98 364.4 580 54.7
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 6.3e-98 362.5 582 58.9
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 1.2e-96 358.2 585 54.7
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 1.2e-96 358.2 585 54.7
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 1.5e-96 357.8 373 61.1
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 2.0e-96 357.5 593 57.5
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 1.4e-94 351.3 585 54.4
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 5.5e-94 349.4 523 50.5
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 3.6e-93 346.7 579 59.1
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 3.0e-92 343.6 580 59.3
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.3e-91 340.1 544 57.9
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 3.7e-90 336.7 578 52.9
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 5.3e-89 332.8 586 52.4
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 3.8e-87 326.6 503 55.9
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 3.0e-84 317.0 357 59.7
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 1.3e-79 301.6 577 50.6
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 8.5e-79 298.9 369 69.1
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 5.2e-76 289.7 578 55.0
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 8.8e-76 288.9 578 54.5
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 8.8e-76 288.9 542 60.3
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.1e-73 282.0 386 52.8
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 1.4e-73 281.6 575 53.9
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 2.4e-73 280.8 584 47.4
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 3.1e-73 280.4 576 53.0
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 7.0e-73 279.3 592 39.9
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 7.0e-73 279.3 592 39.9
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 5.9e-72 276.2 579 52.0
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 5.0e-71 273.1 494 51.8
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 8.5e-71 272.3 580 53.4
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 1.9e-70 271.2 588 50.3
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 1.2e-67 261.9 573 46.2
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 1.1e-65 255.4 367 53.7
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 6.5e-63 246.1 589 52.6
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 1.0e-60 238.8 528 51.9
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 6.4e-50 203.0 519 43.9
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 7.0e-49 199.5 602 27.9
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 5.9e-48 196.4 313 39.6
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 1.4e-28 132.1 208 51.0
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.5e-27 128.6 151 53.0
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 3.2e-25 120.9 225 38.7
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 3.3e-22 110.9 157 42.0
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.5e-19 102.1 213 53.1
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 5.8e-11 73.6 563 37.1
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 1.7e-10 72.0 48 77.1
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 4.9e-10 70.5 48 75.0
Cpa.g.sc79.39 Carica papaya HOM05D006572 ORTHO05D008181 5.1e-07 60.5 66 48.5
HanXRQChr09g0272151 Helianthus annuus HOM05D006572 ORTHO05D008181 5.6e-06 57.0 51 62.7
Cre12.g535400 Chlamydomonas reinhardtii HOM05D006572 ORTHO05D008181 7.4e-06 56.6 130 33.1


User provided reference genes

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