Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 6.8e-82 307.4 166 100.0
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 2.4e-55 219.2 168 72.6
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 2.9e-48 195.7 154 79.2
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 6.9e-42 174.5 161 68.3
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 9.0e-42 174.1 160 59.4
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 1.7e-40 169.9 160 67.5
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 8.4e-40 167.5 155 60.0
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 4.2e-39 165.2 156 56.4
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 9.3e-39 164.1 156 58.3
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 2.7e-38 162.5 159 65.4
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 4.6e-38 161.8 156 66.0
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 6.0e-38 161.4 159 56.0
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 7.9e-38 161.0 153 54.9
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 1.8e-37 159.8 161 52.8
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 1.6e-35 153.3 157 56.7
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 6.2e-35 151.4 170 58.8
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 6.2e-35 151.4 79 86.1
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 8.1e-35 151.0 93 75.3
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.1e-34 150.6 161 52.2
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 1.4e-34 150.2 129 60.5
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 1.8e-34 149.8 161 52.2
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 5.3e-34 148.3 96 69.8
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 5.3e-34 148.3 153 54.9
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 9.0e-34 147.5 85 80.0
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 9.0e-34 147.5 150 53.3
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.5e-33 146.7 158 51.9
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 1.5e-33 146.7 154 54.5
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 2.6e-33 146.0 156 63.5
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 5.8e-33 144.8 157 63.1
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 7.6e-33 144.4 157 63.1
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 7.6e-33 144.4 157 63.1
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 7.6e-33 144.4 156 61.5
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 1.0e-32 144.1 70 90.0
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 2.2e-32 142.9 145 62.1
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 2.9e-32 142.5 78 80.8
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 3.8e-32 142.1 149 59.1
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 3.8e-32 142.1 77 79.2
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 4.9e-32 141.7 66 90.9
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 1.1e-31 140.6 89 70.8
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 2.5e-31 139.4 74 81.1
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 2.5e-31 139.4 93 69.9
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 3.2e-31 139.0 76 80.3
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 3.2e-31 139.0 77 79.2
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 5.5e-31 138.3 91 70.3
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 5.5e-31 138.3 88 69.3
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 5.5e-31 138.3 66 87.9
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 9.3e-31 137.5 76 78.9
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 9.3e-31 137.5 96 66.7
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 1.2e-30 137.1 97 70.1
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 1.2e-30 137.1 76 76.3
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 1.6e-30 136.7 73 80.8
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 2.1e-30 136.3 74 78.4
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 2.1e-30 136.3 152 55.3
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 2.7e-30 136.0 79 74.7
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 2.7e-30 136.0 78 76.9
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 3.5e-30 135.6 82 73.2
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 3.5e-30 135.6 90 70.0
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 3.5e-30 135.6 86 73.3
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 4.6e-30 135.2 79 78.5
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 4.6e-30 135.2 71 83.1
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 4.6e-30 135.2 91 69.2
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 4.6e-30 135.2 88 71.6
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 6.0e-30 134.8 79 74.7
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 6.0e-30 134.8 159 48.4
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 6.0e-30 134.8 78 75.6
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 6.0e-30 134.8 125 55.2
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 6.0e-30 134.8 154 47.4
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 7.9e-30 134.4 83 79.5
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 1.0e-29 134.0 66 86.4
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 1.0e-29 134.0 71 80.3
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 1.0e-29 134.0 79 74.7
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 1.0e-29 134.0 71 80.3
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 1.0e-29 134.0 79 74.7
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 1.0e-29 134.0 79 74.7
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 1.3e-29 133.7 76 75.0
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 1.3e-29 133.7 84 73.8
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 1.8e-29 133.3 91 65.9
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 1.8e-29 133.3 160 49.4
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 1.8e-29 133.3 133 53.4
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 2.3e-29 132.9 77 75.3
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 2.3e-29 132.9 84 75.0
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 2.3e-29 132.9 84 75.0
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 2.3e-29 132.9 76 77.6
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 3.0e-29 132.5 85 74.1
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 3.0e-29 132.5 76 76.3
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 3.0e-29 132.5 71 78.9
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 3.9e-29 132.1 161 46.0
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 3.9e-29 132.1 69 81.2
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 5.1e-29 131.7 76 75.0
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 5.1e-29 131.7 74 77.0
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 6.7e-29 131.3 73 79.5
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 8.7e-29 131.0 63 87.3
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 8.7e-29 131.0 66 84.8
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 4.3e-28 128.6 71 77.5
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 3.7e-27 125.6 94 59.6
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 3.7e-27 125.6 68 76.5
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 4.8e-27 125.2 81 72.8
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 3.1e-26 122.5 69 76.8
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 5.3e-26 121.7 71 76.1
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 5.8e-25 118.2 81 63.0
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 3.8e-24 115.5 97 51.5
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 1.4e-23 113.6 73 65.8
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 3.9e-21 105.5 65 70.8
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 6.7e-21 104.8 73 61.6
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 4.2e-15 85.5 79 50.6
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 3.6e-14 82.4 65 52.3
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 4.2e-07 58.9 49 44.9
MBI06_g44793_MAGBIO Magnolia biondii HOM05D007361 ORTHO05D009239 9.4e-07 57.8 63 44.4


User provided reference genes

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