Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 7.4e-88 327.8 252 100.0
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 2.0e-56 223.4 250 83.6
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 4.1e-54 215.7 262 79.8
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 5.9e-53 211.8 270 77.8
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 1.1e-46 191.0 241 77.6
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 5.0e-44 182.2 241 76.3
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 9.4e-43 177.9 252 72.2
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 1.2e-42 177.6 253 72.7
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 3.6e-42 176.0 252 73.0
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 4.7e-42 175.6 254 71.3
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 4.7e-42 175.6 245 73.9
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 8.0e-42 174.9 249 73.1
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 2.2e-39 166.8 250 70.0
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 2.8e-39 166.4 241 73.9
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 4.8e-39 165.6 255 71.0
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 8.3e-39 164.9 265 69.1
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 3.1e-38 162.9 254 69.7
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 1.2e-37 161.0 254 71.3
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 1.6e-37 160.6 239 71.5
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 4.5e-37 159.1 251 69.7
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 4.5e-37 159.1 261 68.2
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 7.7e-37 158.3 241 72.6
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 7.7e-37 158.3 256 68.0
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 2.3e-36 156.8 241 71.8
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 5.0e-36 155.6 251 69.7
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 6.6e-36 155.2 238 70.6
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 8.6e-36 154.8 241 71.4
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 8.6e-36 154.8 244 70.9
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 1.5e-35 154.1 255 69.0
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 1.5e-35 154.1 251 68.5
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.9e-35 153.7 255 69.0
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.5e-35 153.3 238 72.3
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 3.3e-35 152.9 257 69.3
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 3.3e-35 152.9 251 70.1
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 3.3e-35 152.9 203 83.3
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 5.5e-35 152.1 245 68.6
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 9.5e-35 151.4 255 67.5
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.8e-34 149.8 238 71.8
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 2.8e-34 149.8 251 68.1
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 3.6e-34 149.4 261 68.6
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 8.0e-34 148.3 238 71.8
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 1.0e-33 147.9 241 68.0
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.0e-33 147.9 252 67.5
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 1.4e-33 147.5 263 66.9
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 4.0e-33 146.0 255 66.3
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 4.0e-33 146.0 256 66.0
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 1.2e-32 144.4 253 67.2
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 1.2e-32 144.4 255 64.7
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 2.6e-32 143.3 244 70.1
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 4.4e-32 142.5 259 53.7
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 2.8e-31 139.8 259 62.9
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 2.8e-31 139.8 259 62.9
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 6.3e-31 138.7 244 69.3
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 1.1e-30 137.9 250 67.6
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 4.1e-30 136.0 245 66.1
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 4.1e-30 136.0 245 66.1
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 9.2e-30 134.8 255 64.7
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 1.6e-29 134.0 241 65.1
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 2.7e-29 133.3 252 65.1
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 3.5e-29 132.9 184 78.8
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 4.5e-29 132.5 75 85.3
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 7.8e-29 131.7 243 63.4
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 1.3e-28 131.0 210 71.4
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 1.7e-28 130.6 270 62.2
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.3e-28 130.2 199 58.3
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 2.3e-28 130.2 254 65.7
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 3.9e-28 129.4 244 68.0
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 3.9e-28 129.4 244 68.0
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 3.9e-28 129.4 259 62.5
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 3.9e-28 129.4 278 61.2
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 3.9e-28 129.4 302 57.6
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 5.0e-28 129.0 244 64.3
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 6.6e-28 128.6 74 83.8
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 8.6e-28 128.3 244 64.8
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 1.5e-27 127.5 242 65.3
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 2.5e-27 126.7 241 66.4
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 7.3e-27 125.2 242 64.0
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 9.5e-27 124.8 268 62.3
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 9.5e-27 124.8 250 62.4
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 1.2e-26 124.4 259 63.7
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 3.6e-26 122.9 246 63.8
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 1.4e-25 120.9 68 86.8
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 1.8e-25 120.6 164 84.8
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 3.1e-25 119.8 261 62.8
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 3.1e-25 119.8 80 75.0
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 4.0e-25 119.4 72 79.2
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 1.2e-24 117.9 292 57.5
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 3.4e-24 116.3 241 52.3
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 9.8e-24 114.8 253 62.1
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 1.7e-23 114.0 249 62.7
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 2.9e-23 113.2 71 78.9
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 1.9e-22 110.5 203 72.9
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 3.2e-22 109.8 238 61.3
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 4.6e-21 105.9 272 59.6
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 3.0e-20 103.2 80 60.0
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 6.6e-20 102.1 249 61.0
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.9e-19 100.5 203 70.9
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 1.2e-18 97.8 73 68.5
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 2.8e-18 96.7 238 62.2
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 1.1e-17 94.7 73 67.1
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 1.1e-17 94.7 381 43.8
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.8e-17 94.0 204 35.3
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 2.3e-17 93.6 68 64.7
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 8.9e-17 91.7 201 47.3
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 1.2e-16 91.3 237 60.8
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 1.5e-16 90.9 271 55.4
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 5.8e-16 89.0 285 52.6
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.7e-15 86.3 197 51.8
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 5.4e-14 82.4 245 53.9
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.7e-12 77.4 208 63.0
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 1.7e-12 77.4 105 46.7
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 1.2e-10 71.2 51 56.9
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 2.8e-10 70.1 266 53.0
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 5.2e-09 65.9 34 85.3
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 6.8e-09 65.5 197 59.4
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 8.9e-09 65.1 45 64.4
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 9.9e-08 61.6 36 80.6
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.7e-07 60.8 36 80.6
QL08p050705 Quercus lobata HOM05D006475 ORTHO05D007969 1.9e-06 57.4 51 70.6


User provided reference genes

Program Settings