Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 4.6e-97 357.8 175 100.0
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 4.5e-60 235.0 154 71.4
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.2e-47 193.7 155 60.6
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 5.7e-47 191.4 159 59.7
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 9.8e-47 190.7 155 58.7
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 9.8e-47 190.7 155 58.7
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 6.3e-46 188.0 158 60.1
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 6.3e-46 188.0 155 61.3
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 8.3e-46 187.6 155 60.0
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 9.1e-45 184.1 155 56.1
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 9.1e-45 184.1 155 62.6
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.2e-44 183.7 155 58.7
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 2.7e-44 182.6 155 59.4
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 2.7e-44 182.6 158 59.5
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 1.0e-43 180.6 155 60.6
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 1.3e-43 180.3 160 58.1
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 1.3e-43 180.3 162 57.4
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 2.3e-43 179.5 155 57.4
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 3.8e-43 178.7 160 58.8
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 1.5e-42 176.8 159 56.6
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 2.5e-42 176.0 157 57.3
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 4.2e-42 175.3 157 57.3
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 7.2e-42 174.5 157 57.3
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 7.2e-42 174.5 160 58.1
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 7.2e-42 174.5 160 57.5
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 9.5e-42 174.1 156 60.9
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.6e-41 173.3 155 56.8
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 4.7e-41 171.8 159 55.3
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 8.0e-41 171.0 157 56.7
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 1.8e-40 169.9 192 47.9
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 1.8e-40 169.9 156 55.1
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 3.0e-40 169.1 157 56.7
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 3.0e-40 169.1 157 56.7
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 4.0e-40 168.7 155 55.5
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 2.0e-39 166.4 159 53.5
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 2.0e-39 166.4 156 57.1
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 3.4e-39 165.6 158 53.2
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 3.4e-39 165.6 155 54.2
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 4.4e-39 165.2 158 53.8
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 4.4e-39 165.2 155 54.2
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 5.7e-39 164.9 165 52.1
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 9.8e-39 164.1 156 54.5
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 9.8e-39 164.1 223 44.4
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 1.3e-38 163.7 162 52.5
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 1.7e-38 163.3 159 52.8
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 1.7e-38 163.3 159 52.8
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 2.2e-38 162.9 158 53.8
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 3.7e-38 162.2 155 55.5
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 3.7e-38 162.2 155 52.3
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 3.7e-38 162.2 155 53.5
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 4.9e-38 161.8 155 54.8
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 8.3e-38 161.0 159 52.2
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 1.1e-37 160.6 155 53.5
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 4.1e-37 158.7 159 51.6
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.6e-36 156.8 155 53.5
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 1.6e-36 156.8 158 54.4
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 2.7e-36 156.0 158 53.8
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 3.5e-36 155.6 161 52.2
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 3.5e-36 155.6 155 52.3
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 5.9e-36 154.8 157 53.5
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 5.9e-36 154.8 155 53.5
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 5.9e-36 154.8 156 54.5
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 7.8e-36 154.5 167 51.5
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 1.3e-35 153.7 155 51.0
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 2.3e-35 152.9 155 52.3
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 5.0e-35 151.8 155 51.6
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 5.0e-35 151.8 155 51.6
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 5.0e-35 151.8 148 52.0
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 5.0e-35 151.8 155 51.6
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 5.0e-35 151.8 157 52.9
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 8.6e-35 151.0 157 57.3
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 8.6e-35 151.0 156 48.7
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 1.1e-34 150.6 159 51.6
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.5e-34 150.2 155 52.3
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 1.9e-34 149.8 154 50.0
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 2.5e-34 149.4 152 55.3
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 2.5e-34 149.4 158 50.6
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 3.3e-34 149.1 155 50.3
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 5.6e-34 148.3 162 50.0
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 5.6e-34 148.3 155 51.0
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 9.5e-34 147.5 158 51.3
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 1.6e-33 146.7 159 51.6
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 2.1e-33 146.4 261 36.0
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 2.8e-33 146.0 159 54.7
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 6.2e-33 144.8 156 50.6
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 6.2e-33 144.8 160 50.6
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 6.2e-33 144.8 148 50.7
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 1.0e-32 144.1 160 49.4
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 1.4e-32 143.7 158 50.6
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 1.4e-32 143.7 156 49.4
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 2.3e-32 142.9 141 53.2
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 3.1e-32 142.5 155 51.0
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 5.2e-32 141.7 156 50.6
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 6.8e-32 141.4 160 48.1
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 6.8e-32 141.4 158 51.3
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 1.2e-31 140.6 159 49.1
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 1.2e-31 140.6 159 49.1
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 1.2e-31 140.6 163 47.2
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 1.2e-31 140.6 146 51.4
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 2.0e-31 139.8 160 50.0
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 2.0e-31 139.8 155 51.6
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 5.8e-31 138.3 153 51.6
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 7.5e-31 137.9 156 48.7
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 7.5e-31 137.9 194 43.3
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 9.8e-31 137.5 163 47.9
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 9.8e-31 137.5 161 48.4
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 9.8e-31 137.5 160 50.0
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 1.7e-30 136.7 238 35.7
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 4.9e-30 135.2 154 48.7
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 2.4e-29 132.9 166 47.0
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 2.4e-29 132.9 153 47.1
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 4.1e-29 132.1 157 48.4
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 7.0e-29 131.3 150 45.3
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 9.2e-29 131.0 157 47.8
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 9.2e-29 131.0 157 47.8
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 9.2e-29 131.0 154 49.4
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 1.6e-28 130.2 155 47.1
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 2.0e-28 129.8 150 45.3
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 4.6e-28 128.6 164 48.8
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 4.6e-28 128.6 155 41.9
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 4.6e-28 128.6 155 41.9
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 1.0e-27 127.5 164 43.9
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 1.7e-27 126.7 153 48.4
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 2.3e-27 126.3 186 43.0
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 3.0e-27 125.9 117 57.3
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 3.0e-27 125.9 219 39.3
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 8.6e-27 124.4 165 46.7
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 1.1e-26 124.0 123 52.8
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 3.3e-26 122.5 188 41.5
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 4.3e-26 122.1 158 45.6
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 2.8e-25 119.4 105 53.3
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 2.3e-24 116.3 157 43.9
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 3.1e-24 115.9 163 42.3
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 9.8e-23 110.9 173 36.4
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 8.3e-22 107.8 75 66.7
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 8.3e-22 107.8 140 44.3
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 2.4e-21 106.3 160 39.4
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 2.1e-20 103.2 88 58.0
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 1.3e-19 100.5 158 41.1
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 1.7e-19 100.1 155 39.4
Nitab4.5_0001276g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.7e-19 100.1 73 65.8
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 3.0e-19 99.4 166 36.1
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 5.6e-18 95.1 161 37.3
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 2.1e-17 93.2 72 66.7
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 4.7e-17 92.0 91 56.0
Haze_08255 Corylus avellana HOM05D004587 ORTHO05D005512 4.0e-16 89.0 87 52.9
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 4.0e-16 89.0 156 37.8
Ciclev10033884m.g Citrus clementina HOM05D004587 ORTHO05D005512 1.5e-15 87.0 83 51.8
Cfa012421 Carpinus fangiana HOM05D004587 ORTHO05D005512 2.0e-15 86.7 88 50.0
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 4.4e-15 85.5 75 54.7
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 4.9e-14 82.0 101 43.6
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 6.4e-14 81.6 75 50.7
Pp3c4_4690 Physcomitrium patens HOM05D004587 ORTHO05D005512 1.9e-13 80.1 146 37.7
Nitab4.5_0001276g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 4.1e-13 79.0 93 45.2
SEGI_38344 Sequoiadendron giganteum HOM05D004587 ORTHO05D005512 1.0e-11 74.3 95 42.1
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 1.2e-09 67.4 117 35.0
Sabra19G0094000 Salix brachista HOM05D004587 ORTHO05D005512 1.2e-09 67.4 44 65.9
Actinidia03381 Actinidia chinensis HOM05D004587 ORTHO05D005512 8.1e-09 64.7 79 43.0


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