Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 3.0e-61 238.4 130 100.0
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.8e-45 186.0 130 78.5
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 3.5e-41 171.8 121 77.7
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 1.0e-40 170.2 118 78.8
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.0e-40 170.2 121 76.0
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.3e-40 169.1 110 84.5
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.3e-40 169.1 110 84.5
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 2.5e-39 165.6 128 72.7
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 3.3e-39 165.2 123 74.8
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 1.2e-38 163.3 121 75.2
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 1.6e-38 162.9 118 75.4
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 4.7e-38 161.4 125 72.0
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 6.2e-38 161.0 121 72.7
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 1.1e-37 160.2 108 80.6
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 3.1e-37 158.7 124 70.2
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 5.2e-37 157.9 138 66.7
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 6.8e-37 157.5 117 74.4
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 8.9e-37 157.1 110 78.2
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.2e-36 156.8 130 70.0
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 1.5e-36 156.4 114 77.2
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 4.4e-36 154.8 131 68.7
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 9.8e-36 153.7 121 71.9
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 9.8e-36 153.7 122 71.3
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 1.3e-35 153.3 122 68.9
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 6.4e-35 151.0 113 72.6
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 8.3e-35 150.6 120 72.5
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 8.3e-35 150.6 119 69.7
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.9e-34 149.4 127 69.3
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.9e-34 149.4 118 71.2
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 2.4e-34 149.1 115 75.7
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 4.1e-34 148.3 113 70.8
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 4.1e-34 148.3 113 70.8
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 5.4e-34 147.9 119 67.2
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 5.4e-34 147.9 116 68.1
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 5.4e-34 147.9 116 68.1
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 5.4e-34 147.9 118 71.2
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 7.0e-34 147.5 122 67.2
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 9.2e-34 147.1 118 71.2
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 3.5e-33 145.2 123 69.1
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 3.5e-33 145.2 114 69.3
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 3.5e-33 145.2 119 68.1
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 7.8e-33 144.1 121 64.5
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 1.3e-32 143.3 119 68.9
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 1.3e-32 143.3 109 73.4
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 1.7e-32 142.9 111 74.8
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 2.3e-32 142.5 119 68.1
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 2.3e-32 142.5 159 56.6
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 3.9e-32 141.7 118 67.8
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 3.3e-31 138.7 112 69.6
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 4.3e-31 138.3 113 68.1
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 7.3e-31 137.5 136 58.1
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 1.1e-29 133.7 119 62.2
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 1.1e-29 133.7 102 71.6
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.4e-29 133.3 130 58.5
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 1.8e-29 132.9 119 60.5
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 2.3e-29 132.5 111 71.2
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 3.1e-29 132.1 155 55.5
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 5.2e-29 131.3 118 66.1
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 6.8e-29 131.0 130 57.7
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 8.9e-29 130.6 95 73.7
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 2.0e-28 129.4 108 67.6
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 2.0e-28 129.4 123 60.2
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.0e-28 129.4 118 64.4
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 3.4e-28 128.6 120 62.5
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 4.4e-28 128.3 121 59.5
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 5.8e-28 127.9 112 63.4
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 5.8e-28 127.9 143 55.2
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 7.5e-28 127.5 103 68.9
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 1.7e-27 126.3 110 67.3
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 2.2e-27 125.9 113 65.5
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 2.9e-27 125.6 116 63.8
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 2.9e-27 125.6 116 63.8
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 2.9e-27 125.6 116 63.8
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 2.9e-27 125.6 116 63.8
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 2.9e-27 125.6 116 63.8
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 1.4e-26 123.2 120 60.0
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 2.4e-26 122.5 139 55.4
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 5.4e-26 121.3 118 60.2
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 9.2e-26 120.6 117 59.8
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 6.0e-25 117.9 90 73.3
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 1.0e-24 117.1 123 58.5
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 5.1e-24 114.8 106 60.4
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 2.5e-23 112.5 98 65.3
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 2.5e-23 112.5 80 73.8
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 3.3e-23 112.1 127 56.7
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 7.3e-23 110.9 86 67.4
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 8.1e-22 107.5 120 52.5
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 1.4e-21 106.7 85 67.1
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 3.1e-21 105.5 77 71.4
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.5e-20 103.2 116 54.3
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 2.0e-20 102.8 76 68.4
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 4.4e-20 101.7 79 65.8
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 4.4e-20 101.7 91 63.7
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 4.4e-20 101.7 94 61.7
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 5.8e-20 101.3 96 61.5
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 3.8e-19 98.6 79 65.8
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 1.9e-18 96.3 87 60.9
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 4.2e-18 95.1 113 50.4
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 5.4e-18 94.7 116 51.7
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 1.2e-17 93.6 72 62.5
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 2.3e-16 89.4 66 68.2
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 2.8e-14 82.4 56 80.4
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 2.4e-13 79.3 113 53.1
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 2.4e-13 79.3 113 53.1
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 4.0e-13 78.6 79 63.3
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 1.5e-12 76.6 75 60.0
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 5.8e-12 74.7 56 64.3
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 2.2e-11 72.8 125 41.6
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 2.2e-11 72.8 65 60.0
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 7.1e-10 67.8 103 41.7
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 1.3e-08 63.5 47 68.1
Sed0003750 Sechium edule HOM05D006869 ORTHO05D008641 4.3e-07 58.5 50 68.0
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 3.6e-06 55.5 62 54.8


User provided reference genes

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