Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G057800 Carya illinoinensis HOM05D008168 ORTHO05D010284 9.5e-101 370.2 184 100.0
Dinv06690 Davidia involucrata HOM05D008168 ORTHO05D010284 3.2e-96 355.1 183 97.3
Lsat_1_v5_gn_5_185960 Lactuca sativa HOM05D008168 ORTHO05D010284 4.0e-91 338.2 179 95.0
Sed0019148 Sechium edule HOM05D008168 ORTHO05D010284 6.8e-91 337.4 179 95.0
Actinidia34824 Actinidia chinensis HOM05D008168 ORTHO05D010284 7.5e-90 334.0 183 91.8
TPR.G35326 Trifolium pratense HOM05D008168 ORTHO05D010284 7.5e-90 334.0 183 93.4
HanXRQChr08g0236051 Helianthus annuus HOM05D008168 ORTHO05D010284 1.1e-88 330.1 174 95.4
HanXRQChr01g0029671 Helianthus annuus HOM05D008168 ORTHO05D010284 2.7e-87 325.5 183 90.2
Cpa.g.sc263.12 Carica papaya HOM05D008168 ORTHO05D010284 2.1e-84 315.8 162 96.9
Nitab4.5_0001761g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 3.1e-75 285.4 179 82.7
Sp3g25580 Schrenkiella parvula HOM05D008168 ORTHO05D010284 4.6e-71 271.6 183 79.2
Nitab4.5_0000172g2220 Nicotiana tabacum HOM05D008168 ORTHO05D010284 8.6e-70 267.3 172 82.0
unitig_87.g27979 Utricularia gibba HOM05D008168 ORTHO05D010284 1.5e-61 240.0 126 92.9
CAN.G1632.16 Capsicum annuum HOM05D008168 ORTHO05D010284 2.5e-61 239.2 126 93.7
CAN.G298.7 Capsicum annuum HOM05D008168 ORTHO05D010284 2.5e-61 239.2 126 93.7
CsaV3_6G025200 Cucumis sativus L. HOM05D008168 ORTHO05D010284 2.6e-58 229.2 121 94.2
CsaV3_6G025280 Cucumis sativus L. HOM05D008168 ORTHO05D010284 2.6e-58 229.2 121 94.2
Sp5g20300 Schrenkiella parvula HOM05D008168 ORTHO05D010284 6.4e-57 224.6 183 68.3
AT2G07641 Arabidopsis thaliana HOM05D008168 ORTHO05D010284 2.7e-55 219.2 114 94.7
Nitab4.5_0004030g0020 Nicotiana tabacum HOM05D008168 ORTHO05D010284 4.6e-55 218.4 122 88.5
BraSC159t45716Z Brassica rapa HOM05D008168 ORTHO05D010284 1.5e-53 213.4 115 93.0
FAN20G1169 Fragaria x ananassa HOM05D008168 ORTHO05D010284 1.1e-51 207.2 132 81.8
MBI05_g05357_MAGBIO Magnolia biondii HOM05D008168 ORTHO05D010284 1.5e-50 203.4 171 66.7
Gohir.A03G133725 Gossypium hirsutum HOM05D008168 ORTHO05D010284 2.0e-50 203.0 142 76.1
EL10Ac7g17837 Beta vulgaris HOM05D008168 ORTHO05D010284 7.4e-45 184.5 116 79.3
Nitab4.5_0000127g0080 Nicotiana tabacum HOM05D008168 ORTHO05D010284 4.8e-44 181.8 109 84.4
FAN26G1478 Fragaria x ananassa HOM05D008168 ORTHO05D010284 3.1e-43 179.1 130 73.8
Nitab4.5_0000788g0030 Nicotiana tabacum HOM05D008168 ORTHO05D010284 4.0e-43 178.7 185 61.6
CsaV3_6G024000 Cucumis sativus L. HOM05D008168 ORTHO05D010284 5.8e-42 174.9 114 79.8
Nitab4.5_0001919g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.9e-40 169.9 116 79.3
MBI10_g03713_MAGBIO Magnolia biondii HOM05D008168 ORTHO05D010284 6.0e-39 164.9 125 73.6
Thecc.08G162700 Theobroma cacao HOM05D008168 ORTHO05D010284 8.4e-33 144.4 98 73.5
RcHm_v2.0_MTg0498271 Rosa chinensis HOM05D008168 ORTHO05D010284 1.3e-30 137.1 102 74.5
CDE02G1379 Ceratophyllum demersum HOM05D008168 ORTHO05D010284 2.2e-28 129.8 89 78.7
Lsat_1_v5_gn_3_75761 Lactuca sativa HOM05D008168 ORTHO05D010284 2.0e-26 123.2 69 91.3
BraSC54t46354Z Brassica rapa HOM05D008168 ORTHO05D010284 3.2e-24 115.9 104 61.5
Nitab4.5_0002558g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.1e-21 107.5 59 89.8
Nitab4.5_0006806g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.8e-19 100.1 60 86.7
AUR62043793 Chenopodium quinoa HOM05D008168 ORTHO05D010284 2.6e-18 96.3 56 89.3
AUR62043904 Chenopodium quinoa HOM05D008168 ORTHO05D010284 2.6e-18 96.3 56 89.3
AUR62043912 Chenopodium quinoa HOM05D008168 ORTHO05D010284 2.6e-18 96.3 56 89.3
Phvul.011G101750 Phaseolus vulgaris HOM05D008168 ORTHO05D010284 6.3e-12 75.1 37 91.9
Nn3g20243 Nelumbo nucifera HOM05D008168 ORTHO05D010284 6.1e-07 58.5 29 93.1


User provided reference genes

Program Settings