Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G057700 Carya illinoinensis HOM05D000533 ORTHO05D011488 3.7e-51 204.5 99 100.0
Aqoxy3G01142 Aquilegia oxysepala HOM05D000533 ORTHO05D011488 4.2e-39 164.5 81 96.3
CARHR287180 Cardamine hirsuta HOM05D000533 ORTHO05D011488 2.3e-37 158.7 81 92.6
Lsat_1_v5_gn_7_67841 Lactuca sativa HOM05D000533 ORTHO05D011488 1.5e-36 156.0 81 90.1
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 2.4e-34 148.7 78 88.5
HanXRQChr10g0297221 Helianthus annuus HOM05D000533 ORTHO05D011488 3.1e-34 148.3 81 86.4
RhsimMtG0002300 Rhododendron simsii HOM05D000533 ORTHO05D001069 1.3e-32 142.9 71 94.4
SabraMtG0006600 Salix brachista HOM05D000533 ORTHO05D001069 5.0e-32 141.0 74 89.2
arahy.Tifrunner.gnm1.ann1.20VADI Arachis hypogaea HOM05D000533 ORTHO05D011488 2.1e-30 135.6 71 90.1
arahy.Tifrunner.gnm1.ann1.2U5581 Arachis hypogaea HOM05D000533 ORTHO05D011488 2.1e-30 135.6 71 90.1
arahy.Tifrunner.gnm1.ann1.EH7RRY Arachis hypogaea HOM05D000533 ORTHO05D011488 2.1e-30 135.6 71 90.1
unitig_87.g27978 Utricularia gibba HOM05D000533 ORTHO05D011488 3.6e-30 134.8 80 83.8
Nn1g10104 Nelumbo nucifera HOM05D000533 ORTHO05D001069 1.0e-29 133.3 72 88.9
Lalb_Chr01g0010861 Lupinus albus HOM05D000533 ORTHO05D011488 6.8e-29 130.6 71 87.3
CsaV3_6G023980 Cucumis sativus L. HOM05D000533 ORTHO05D011488 1.5e-28 129.4 63 96.8
CsaV3_6G025260 Cucumis sativus L. HOM05D000533 ORTHO05D011488 1.5e-28 129.4 63 96.8
CsaV3_UNG208480 Cucumis sativus L. HOM05D000533 ORTHO05D011488 1.5e-28 129.4 63 96.8
Phvul.011G124215 Phaseolus vulgaris HOM05D000533 ORTHO05D011488 3.4e-28 128.3 70 85.7
ATR0645G003 Amborella trichopoda HOM05D000533 ORTHO05D011488 5.7e-28 127.5 63 95.2
Lalb_Chr00c54g0413551 Lupinus albus HOM05D000533 ORTHO05D011488 5.7e-28 127.5 63 95.2
Cpa.g.sc263.10 Carica papaya HOM05D000533 ORTHO05D011488 3.7e-27 124.8 63 93.7
HanXRQChr14g0434371 Helianthus annuus HOM05D000533 ORTHO05D001069 4.6e-25 117.9 60 91.7
Solyc00g500183.1 Solanum lycopersicum HOM05D000533 ORTHO05D011488 3.9e-24 114.8 56 92.9
Lalb_Chr00c24g0407321 Lupinus albus HOM05D000533 ORTHO05D011488 2.3e-21 105.5 54 90.7
Nitab4.5_0001034g0060 Nicotiana tabacum HOM05D000533 ORTHO05D011488 6.8e-21 104.0 56 87.5
PGSC0003DMG400013204 Solanum tuberosum HOM05D000533 ORTHO05D011488 1.3e-19 99.8 54 88.9
Hma1.2p1_0386F.1_g141700 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 1.7e-19 99.4 54 87.0
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 6.4e-19 97.4 54 85.2
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 8.3e-19 97.1 54 85.2
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 1.9e-18 95.9 54 85.2
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 2.4e-18 95.5 48 93.8
Nitab4.5_0000859g0010 Nicotiana tabacum HOM05D000533 ORTHO05D011488 3.2e-18 95.1 58 77.6
Peaxi162Scf00197g00046 Petunia axillaris HOM05D000533 ORTHO05D011488 9.2e-18 93.6 48 89.6
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 2.7e-17 92.0 54 85.2
Sp3g25570 Schrenkiella parvula HOM05D000533 ORTHO05D001069 3.5e-17 91.7 47 91.5
SHI36143 Sapria himalayana HOM05D000533 ORTHO05D011488 4.6e-17 91.3 54 81.5
Sp5g20290 Schrenkiella parvula HOM05D000533 ORTHO05D011488 7.8e-17 90.5 62 72.6
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 1.3e-16 89.7 55 74.5
Phvul.009G072400 Phaseolus vulgaris HOM05D000533 ORTHO05D011488 1.7e-16 89.4 73 65.8
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 5.0e-16 87.8 53 75.5
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 5.0e-16 87.8 44 93.2
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 1.1e-15 86.7 46 89.1
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 2.1e-14 82.4 50 78.0
Glyma.14G103300 Glycine max HOM05D000533 ORTHO05D001069 4.7e-14 81.3 47 78.7
GSVIVG01004967001 Vitis vinifera HOM05D000533 ORTHO05D011488 8.1e-14 80.5 54 77.8
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 4.4e-12 74.7 52 59.6
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 7.5e-12 73.9 48 66.7
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 7.5e-12 73.9 47 70.2
SHI51311 Sapria himalayana HOM05D000533 ORTHO05D011488 2.2e-11 72.4 54 72.2
Nitab4.5_0015438g0010 Nicotiana tabacum HOM05D007877 ORTHO05D009957 2.9e-11 72.0 75 54.7
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 4.9e-11 71.2 53 60.4
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 1.1e-10 70.1 49 63.3
BolSC28t60428H Brassica oleracea HOM05D000533 ORTHO05D011488 3.9e-08 61.6 30 93.3
Pp3c7_10190 Physcomitrium patens HOM05D000533 ORTHO05D011488 9.5e-07 57.0 33 75.8
Mapoly0031s0086 Marchantia polymorpha HOM05D000533 ORTHO05D011488 1.6e-06 56.2 33 72.7
SHI35303 Sapria himalayana HOM05D011739 ORTHO05D012473 2.1e-06 55.8 44 63.6
Mapoly0031s0085 Marchantia polymorpha HOM05D000533 ORTHO05D011488 2.8e-06 55.5 33 69.7


User provided reference genes

Program Settings