Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G051200 Carya illinoinensis HOM05D007712 ORTHO05D009755 2.5e-23 111.3 59 100.0
CiPaw.11G080700 Carya illinoinensis HOM05D007712 ORTHO05D009755 4.2e-18 94.0 59 86.4
Prupe.5G067000 Prunus persica HOM05D007712 ORTHO05D009755 1.2e-17 92.4 59 86.4
MD06G1056600 Malus domestica HOM05D007712 ORTHO05D009755 2.1e-17 91.7 59 86.4
Thecc.03G249200 Theobroma cacao HOM05D007712 ORTHO05D009755 2.7e-17 91.3 59 84.7
RcHm_v2.0_Chr7g0203631 Rosa chinensis HOM05D007712 ORTHO05D009755 4.6e-17 90.5 59 83.1
MD04G1062500 Malus domestica HOM05D007712 ORTHO05D009755 1.0e-16 89.4 59 83.1
CSS0007152 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 1.4e-16 89.0 59 83.1
Migut.A01117 Erythranthe guttata HOM05D007712 ORTHO05D009755 1.8e-16 88.6 54 83.3
Nn6g33914 Nelumbo nucifera HOM05D007712 ORTHO05D009755 1.8e-16 88.6 59 83.1
Gohir.D12G218700 Gossypium hirsutum HOM05D007712 ORTHO05D009755 2.3e-16 88.2 59 81.4
Gorai.008G234300 Gossypium raimondii HOM05D007712 ORTHO05D009755 2.3e-16 88.2 59 81.4
AL7G38040 Arabidopsis lyrata HOM05D007712 ORTHO05D009755 3.9e-16 87.4 59 79.7
Sp7g15330 Schrenkiella parvula HOM05D007712 ORTHO05D009755 3.9e-16 87.4 57 80.7
Potri.001G156500 Populus trichocarpa HOM05D007712 ORTHO05D009755 5.1e-16 87.0 53 84.9
AT4G16695 Arabidopsis thaliana HOM05D007712 ORTHO05D009755 8.8e-16 86.3 59 78.0
CARHR223220 Cardamine hirsuta HOM05D007712 ORTHO05D009755 8.8e-16 86.3 59 78.0
Eucgr.E00411 Eucalyptus grandis HOM05D007712 ORTHO05D009755 2.5e-15 84.7 57 82.5
Medtr4g100770 Medicago truncatula HOM05D007712 ORTHO05D009755 2.5e-15 84.7 59 78.0
TWI60G0592 Tripterygium wilfordii HOM05D007712 ORTHO05D009755 4.3e-15 84.0 55 81.8
Lsat_1_v5_gn_6_18000 Lactuca sativa HOM05D007712 ORTHO05D009755 5.7e-15 83.6 56 80.4
C01p25890 Brassica napus HOM05D007712 ORTHO05D009755 7.4e-15 83.2 53 81.1
CSS0012443 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 9.7e-15 82.8 53 84.9
Lj4g0003995 Lotus japonicus HOM05D007712 ORTHO05D009755 9.7e-15 82.8 60 78.3
Manes.02G041000 Manihot esculenta HOM05D007712 ORTHO05D009755 9.7e-15 82.8 55 80.0
Nn1g00955 Nelumbo nucifera HOM05D007712 ORTHO05D009755 9.7e-15 82.8 55 83.6
Psat4g072600 Pisum sativum HOM05D007712 ORTHO05D009755 1.3e-14 82.4 59 76.3
Aa31LG2G12880 Aethionema arabicum HOM05D007712 ORTHO05D009755 1.7e-14 82.0 53 81.1
A01p20590 Brassica napus HOM05D007712 ORTHO05D009755 1.7e-14 82.0 51 82.4
BraA01t01987Z Brassica rapa HOM05D007712 ORTHO05D009755 1.7e-14 82.0 51 82.4
COL.COLO4_37150 Corchorus olitorius HOM05D007712 ORTHO05D009755 2.8e-14 81.3 53 81.1
Manes.01G082000 Manihot esculenta HOM05D007712 ORTHO05D009755 2.8e-14 81.3 53 83.0
PSO063G7306 Papaver somniferum HOM05D007712 ORTHO05D009755 2.8e-14 81.3 59 76.3
BcaNung00160 Brassica carinata HOM05D007712 ORTHO05D009755 3.7e-14 80.9 53 79.2
Cpa.g.sc29.177 Carica papaya HOM05D007712 ORTHO05D009755 3.7e-14 80.9 53 83.0
Gohir.A12G216100 Gossypium hirsutum HOM05D007712 ORTHO05D009755 4.8e-14 80.5 53 81.1
BolC1t02534H Brassica oleracea HOM05D007712 ORTHO05D009755 6.3e-14 80.1 47 87.2
Haze_07896 Corylus avellana HOM05D007712 ORTHO05D009755 6.3e-14 80.1 53 83.0
Hma1.2p1_0316F.1_g122970 Hydrangea macrophylla HOM05D007712 ORTHO05D009755 6.3e-14 80.1 53 83.0
Duzib205G0100 Durio zibethinus HOM05D007712 ORTHO05D009755 8.2e-14 79.7 53 81.1
Glyma.05G061200 Glycine max HOM05D007712 ORTHO05D009755 1.1e-13 79.3 53 81.1
Glyma.17G143000 Glycine max HOM05D007712 ORTHO05D009755 1.1e-13 79.3 53 81.1
Carub.0007s2470 Capsella rubella HOM05D007712 ORTHO05D009755 1.8e-13 78.6 53 77.4
MELO3C005524.2 Cucumis melo HOM05D007712 ORTHO05D009755 1.8e-13 78.6 53 77.4
Duzib068G1393 Durio zibethinus HOM05D007712 ORTHO05D009755 1.8e-13 78.6 53 81.1
TAR629G1768 Trochodendron aralioides HOM05D007712 ORTHO05D009755 1.8e-13 78.6 58 75.9
Ca_21974_v3 Cicer arietinum L. HOM05D007712 ORTHO05D009755 2.4e-13 78.2 53 79.2
Ciclev10023737m.g Citrus clementina HOM05D007712 ORTHO05D009755 2.4e-13 78.2 51 78.4
DCAR_006839 Daucus carota HOM05D007712 ORTHO05D009755 2.4e-13 78.2 53 79.2
Potri.003G078100 Populus trichocarpa HOM05D007712 ORTHO05D009755 2.4e-13 78.2 53 79.2
Sed0021045 Sechium edule HOM05D007712 ORTHO05D009755 2.4e-13 78.2 53 77.4
PGR031G2779 Punica granatum HOM05D007712 ORTHO05D009755 4.1e-13 77.4 53 77.4
HanXRQChr16g0510951 Helianthus annuus HOM05D007712 ORTHO05D009755 5.3e-13 77.0 54 75.9
EL10Ac5g12378 Beta vulgaris HOM05D007712 ORTHO05D009755 6.9e-13 76.6 49 83.7
PSO782G1928 Papaver somniferum HOM05D007712 ORTHO05D009755 6.9e-13 76.6 53 79.2
Phvul.003G221800 Phaseolus vulgaris HOM05D007712 ORTHO05D009755 6.9e-13 76.6 53 79.2
ClCG01G004140 Citrullus lanatus HOM05D007712 ORTHO05D009755 9.1e-13 76.3 54 75.9
DCAR_008500 Daucus carota HOM05D007712 ORTHO05D009755 9.1e-13 76.3 53 75.5
VMungo0251G2826 Vigna mungo HOM05D007712 ORTHO05D009755 9.1e-13 76.3 54 77.8
Duzib268G1849 Durio zibethinus HOM05D007712 ORTHO05D009755 1.2e-12 75.9 59 69.5
BcaC06g33508 Brassica carinata HOM05D007712 ORTHO05D009755 1.5e-12 75.5 45 86.7
C07p48200 Brassica napus HOM05D007712 ORTHO05D009755 1.5e-12 75.5 45 86.7
BolC7t45343H Brassica oleracea HOM05D007712 ORTHO05D009755 1.5e-12 75.5 45 86.7
Lalb_Chr16g0386781 Lupinus albus HOM05D007712 ORTHO05D009755 1.5e-12 75.5 59 71.2
Lalb_Chr05g0221211 Lupinus albus HOM05D007712 ORTHO05D009755 2.0e-12 75.1 56 73.2
CANSAT21G0844 Cannabis sativa HOM05D007712 ORTHO05D009755 3.4e-12 74.3 48 83.3
Solyc08g078480.3 Solanum lycopersicum HOM05D007712 ORTHO05D009755 5.9e-12 73.6 54 74.1
PGSC0003DMG402004821 Solanum tuberosum HOM05D007712 ORTHO05D009755 5.9e-12 73.6 54 74.1
HPP92_021033 Vanilla planifolia HOM05D007712 ORTHO05D009755 5.9e-12 73.6 50 72.0
HPP92_027434 Vanilla planifolia HOM05D007712 ORTHO05D009755 5.9e-12 73.6 50 72.0
ATR0317G046 Amborella trichopoda HOM05D007712 ORTHO05D009755 1.0e-11 72.8 53 73.6
SHI02516 Sapria himalayana HOM05D007712 ORTHO05D009755 2.9e-11 71.2 49 77.6
Nitab4.5_0002289g0090 Nicotiana tabacum HOM05D007712 ORTHO05D009755 3.8e-11 70.9 50 74.0
HanXRQChr11g0345641 Helianthus annuus HOM05D007712 ORTHO05D009755 6.5e-11 70.1 48 75.0
THA.LOC104815500 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 8.5e-11 69.7 53 73.6
HanXRQChr13g0400821 Helianthus annuus HOM05D007712 ORTHO05D009755 1.1e-10 69.3 48 75.0
Pp3c5_22940 Physcomitrium patens HOM05D007712 ORTHO05D009755 1.4e-10 68.9 56 67.9
BraA08t33255Z Brassica rapa HOM05D007712 ORTHO05D009755 2.5e-10 68.2 46 78.3
Mapoly0033s0142 Marchantia polymorpha HOM05D007712 ORTHO05D009755 4.2e-10 67.4 53 71.7
vmacro00192 Vaccinium macrocarpon HOM05D007712 ORTHO05D009755 4.2e-10 67.4 41 82.9
CBR_g755 Chara braunii HOM05D007712 ORTHO05D009755 5.5e-10 67.0 53 64.2
Nitab4.5_0001381g0130 Nicotiana tabacum HOM05D007712 ORTHO05D009755 5.5e-10 67.0 48 72.9
A03p50120 Brassica napus HOM05D007712 ORTHO05D009755 9.4e-10 66.2 38 81.6
CAN.G1178.28 Capsicum annuum HOM05D007712 ORTHO05D009755 9.4e-10 66.2 49 71.4
unitig_744.g24472 Utricularia gibba HOM05D007712 ORTHO05D009755 2.7e-09 64.7 53 66.0
THA.LOC104815513 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 2.0e-07 58.5 39 82.1
Os03g0102000 Oryza sativa ssp. japonica HOM05D007712 ORTHO05D009755 4.4e-07 57.4 57 56.1
FAN08G0196 Fragaria x ananassa HOM05D007712 ORTHO05D009755 8.2e-06 53.1 32 90.6


User provided reference genes

Program Settings