Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 1.2e-72 276.6 149 100.0
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 9.8e-56 220.3 151 80.8
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 9.9e-40 167.2 135 68.9
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 3.9e-36 155.2 135 64.4
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 8.6e-36 154.1 136 59.6
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.1e-35 153.7 137 64.2
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 2.5e-35 152.5 136 58.8
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 8.1e-34 147.5 140 59.3
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 8.1e-34 147.5 135 61.5
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 8.1e-34 147.5 96 79.2
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 1.1e-33 147.1 105 73.3
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 1.1e-33 147.1 145 60.0
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.8e-33 146.4 127 65.4
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 3.1e-33 145.6 105 74.3
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 4.0e-33 145.2 149 59.7
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 4.0e-33 145.2 134 62.7
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 5.2e-33 144.8 136 61.8
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 6.8e-33 144.4 152 55.9
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 6.8e-33 144.4 125 61.6
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 1.2e-32 143.7 143 58.0
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 2.0e-32 142.9 138 59.4
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 3.4e-32 142.1 126 63.5
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 4.4e-32 141.7 142 59.2
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 7.6e-32 141.0 136 61.0
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 7.6e-32 141.0 134 60.4
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 7.6e-32 141.0 136 58.8
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.7e-31 139.8 119 64.7
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 1.7e-31 139.8 105 73.3
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 2.2e-31 139.4 149 56.4
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 2.2e-31 139.4 118 65.3
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.8e-31 138.7 127 60.6
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 4.9e-31 138.3 123 63.4
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 4.9e-31 138.3 140 57.1
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 6.4e-31 137.9 163 54.0
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 6.4e-31 137.9 122 62.3
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 8.4e-31 137.5 149 57.7
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 1.1e-30 137.1 109 66.1
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 1.9e-30 136.3 106 67.9
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.4e-30 136.0 122 61.5
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 2.4e-30 136.0 95 73.7
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 3.2e-30 135.6 133 58.6
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 4.1e-30 135.2 149 55.0
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 5.4e-30 134.8 110 68.2
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 5.4e-30 134.8 130 63.1
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 7.1e-30 134.4 148 56.8
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 1.6e-29 133.3 138 56.5
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 1.6e-29 133.3 108 61.1
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.6e-29 133.3 138 57.2
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 1.6e-29 133.3 129 58.1
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 2.7e-29 132.5 111 63.1
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.7e-29 132.5 125 58.4
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 2.7e-29 132.5 144 54.2
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 3.5e-29 132.1 115 63.5
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 4.6e-29 131.7 136 58.1
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 6.0e-29 131.3 141 53.2
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 7.8e-29 131.0 144 54.9
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 1.3e-28 130.2 141 56.7
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.3e-28 130.2 92 71.7
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 1.3e-28 130.2 147 50.3
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 2.3e-28 129.4 142 53.5
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 2.3e-28 129.4 143 53.1
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 2.3e-28 129.4 137 55.5
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 2.3e-28 129.4 88 77.3
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 3.9e-28 128.6 109 59.6
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 8.7e-28 127.5 147 51.7
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.1e-27 127.1 83 75.9
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 1.1e-27 127.1 136 56.6
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 4.3e-27 125.2 111 60.4
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 4.3e-27 125.2 129 54.3
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 4.3e-27 125.2 134 54.5
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 5.6e-27 124.8 122 57.4
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.2e-26 123.6 106 59.4
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 2.1e-26 122.9 117 59.0
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 2.8e-26 122.5 134 53.0
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 4.7e-26 121.7 104 59.6
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 4.7e-26 121.7 95 64.2
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 6.2e-26 121.3 130 56.2
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 6.2e-26 121.3 160 50.0
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.1e-25 120.6 145 49.7
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 1.4e-25 120.2 104 58.7
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 1.4e-25 120.2 129 55.0
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 3.1e-25 119.0 88 70.5
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 3.1e-25 119.0 148 52.0
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 3.1e-25 119.0 112 58.9
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 4.0e-25 118.6 104 57.7
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 9.0e-25 117.5 91 65.9
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 9.0e-25 117.5 95 65.3
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 2.6e-24 115.9 91 64.8
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 7.6e-24 114.4 95 64.2
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 1.3e-23 113.6 107 59.8
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 1.7e-23 113.2 92 63.0
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 2.2e-23 112.8 88 67.0
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 2.2e-23 112.8 165 44.2
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.9e-23 112.5 164 45.1
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 3.2e-22 109.0 121 52.9
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 4.2e-22 108.6 104 58.7
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 5.4e-22 108.2 143 46.2
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 5.4e-22 108.2 78 71.8
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 3.9e-20 102.1 101 53.5
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 1.9e-19 99.8 94 58.5
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 1.9e-19 99.8 84 70.2
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 7.3e-19 97.8 92 56.5
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 9.6e-19 97.4 130 47.7
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 1.3e-18 97.1 103 45.6
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 2.1e-18 96.3 72 72.2
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-17 93.6 105 44.8
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 9.0e-17 90.9 67 71.6
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 9.9e-16 87.4 107 49.5
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 1.3e-15 87.0 90 46.7
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.1e-14 84.0 119 44.5
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 1.4e-14 83.6 98 43.9
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 5.4e-14 81.6 93 48.4
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 1.8e-12 76.6 95 41.1


User provided reference genes

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